Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00589 ATGCCAAGCCCCAAGAGCAACCGCAACGCCCATAACGAAACTCACCGGAGGGGAAGGTCTTCCTCTTTCCACGGCCACACCGCCATGTCCGTCGCTCAGCTCCGCCGTCCGATGACGGTTTCCGACCTCTCCTCCCTCCGAAGCCACGCCGGAACGCCGGCGACGGCGCCGGAGGGCTTGCCGAGGCATCCGGCCAAGATGCTGCTGAAGGTGACGGTGCTCCGAAGCCTCGCGCCCGTGCAGGTGCTCATGACCACGGAATCCTCCGTCGGCCACCTGATTGTGGCGGCGCTGCGGCAGTACGTGAAGGAAGGTCGCCGCCCGATCCTTCCGTCCGACGAAGCCTCCGATTTCGACCTCCATTATTCGCAGTTTAGCCTAGAAAGTTTGGATAAGGAGGAGAAGCTGAAAGAACTTGGATCCAGGAACTTCTTTCTGTGTCCGAGAAAGGTTGAAGGTGGCGTTGCGACGCCGTTTGTTTCGTGTGCGAAGGAGGCAGACAGAGTAGCGGCGAGCCATGGATGCGGTGGCGGTGGCGGCGGTTTTGCGTGGTTCAAACTGATGCAATTCATGATGTGA 579 0.6028 MPSPKSNRNAHNETHRRGRSSSFHGHTAMSVAQLRRPMTVSDLSSLRSHAGTPATAPEGLPRHPAKMLLKVTVLRSLAPVQVLMTTESSVGHLIVAALRQYVKEGRRPILPSDEASDFDLHYSQFSLESLDKEEKLKELGSRNFFLCPRKVEGGVATPFVSCAKEADRVAASHGCGGGGGGFAWFKLMQFMM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00589 192 MobiDBLite consensus disorder prediction 1 25 - -
Cca10g00589 192 PANTHER BNAC05G50380D PROTEIN 2 190 IPR040358 -
Cca10g00589 192 MobiDBLite consensus disorder prediction 41 61 - -
Cca10g00589 192 PANTHER EXPRESSED PROTEIN 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00589 Cca-Chr10 6424948 6426941 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00589 - - gmx:100786612 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00589 10 6424948 6426941 Cca10g00589 10 6424948 6426941 ECH
Cca10g00589 10 6424948 6426941 Cca04g00877 04 9217039 9224321 PCT