Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00576 ATGGCGCTATCTTGGCCGCACGTGCTGCAGTTCCGTTCTCAACCACTTCTCGGACACGCTAACTGCGTGTTCTTCTCGGATCTTACGGAATCTCGCTCTCTGGAGCTTTCATGCACTGATTCCCTCGCTCTGCTACGCCGGTGCAAAATCTCCGTGCCGTCTCCGGCGGCGGTGAGGCCGGTGAAATGCCTCGGCAGATCTACGGAGGAGAAGCAGTGGAGTGACGCTGAAACTGCCGTGTCCGACTCCGACGAAGTTTCCGACGGGCCGAATGAGCGGAGCCGGAATTCCGTTCCGACAAACGGTCGTGTGGAGTCGCAGAGGATTGTTTCCGCGTCTTCCGGCGATTCTCTATCTCTCGGAATTCGAGAACCGGTTTACGAAGTTGTTGAAGTGAAGTCTAATGGGAAAGTATCAACTAGGAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCATCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACTATAATCGTATAGGAGGAAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGAGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCTCTTCTTGACGCCTTGCCTAATCGCTTAACTGGTGACATCTTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGTATGTGTATCATGGGAAGAAACTGCACACTTAATAAAGGAAATGATGATATGGAATGCTCAGTGCCTTTAGAAAAGCAGATTGCTGAGGAGGAAGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCCGAAAGGCTTCTTGATTCTGCAAGAGAAATGGAAGATTCTATATCTGTCAGTTTGAGTTCACGAAGGCTTGAGGTTAGCAGAGTAGAACTGCTTCTGCAGGTTGGAACATTCTGTGTGGCAATAGGTGCCCTCGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTTGCATTTTGGCTGACGACAGCAGGGATAATTGTTGGTGGCATTATTGCTTTCTTTCTGATGTATTACTACCTCAGAGCTAGGAAAATATTTTGA 1371 0.4624 MALSWPHVLQFRSQPLLGHANCVFFSDLTESRSLELSCTDSLALLRRCKISVPSPAAVRPVKCLGRSTEEKQWSDAETAVSDSDEVSDGPNERSRNSVPTNGRVESQRIVSASSGDSLSLGIREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSISVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGGIIAFFLMYYYLRARKIF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00576 456 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
Cca10g00576 456 CDD Mrs2_Mfm1p-like 129 455 IPR039204 -
Cca10g00576 456 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 51 455 - -
Cca10g00576 456 Pfam CorA-like Mg2+ transporter protein 339 445 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca10g00576 456 Coils Coil 245 265 - -
Cca10g00576 456 MobiDBLite consensus disorder prediction 73 110 - -
Cca10g00576 456 Gene3D - 122 203 - -
Cca10g00576 456 Coils Coil 336 356 - -
Cca10g00576 456 MobiDBLite consensus disorder prediction 92 110 - -
Cca10g00576 456 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 51 455 IPR039204 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00576 120 456 MRS2 Gene Family AT5G22830 83.383 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00576 K16075 - gmx:100808371 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00576 10 6293466 6300543 Cca10g00576 10 6293466 6300543 ECH