Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca10g00536 | ATGTGCAAGACAAAGATGGCAATCGACGCGGCCAGCCCCACCCGAACCTCTCGCACCGAACAACGCGCCAACCAAAGCCCAAGAACATCCTCCTCCAGGCCCACTCCGGGGCCCATCGCTTCTTTCTCAGAGAAaccatccacctcaagcagcaccaccaccaccgcgccctacaccggctccaccGGCTACAGGCTATCCTCCGACACCTCCATCTCCAGCCGCACCTCCCTCACCTCCCTCCGCGACACGCTCCCTGAGAACCCTCACATCTACCAATTCTCCGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACGCCCTGCTGGCGCTGCACGCTTCGCGGCGCCGACGTCATTGTCTTCCAGCGCAAGTTCCGCCGCATGCTCCAAACCTCTCAGCTCCAGAACCTCCTCGCCATCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCACGGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCCACGGAGCCAGCCTCTCCGACTGCCTCCGCAGCAAGAACAACGCGCACTTCACCGTCCTCTCCACGTGGATGTCCAGAATGCAGGTCGCCGCGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTCTGAACATCAACTTCGTTCACAGCCACATCAAGACCAGCGGAATCATCGTCACTGAGCCTTCCTTCAACGCTAGGGTTTGCCACTTCGGCACCGCGCAGCTCTGCGGCGAAATCGACCTCCAGACCGACAAATTAAGCGAAATCCGCGAGGAAACGCCTTCTCCGGCGAGATCCAAGCAATTCGAGGGCGTGCGAGGGTACATGGCGCCGGAATTTCAAGTCTCCGGCGTCGCCACTCAGAAATCCGACGTGTACGCTTTCGGAGTGGTGATATTGGAGCTTTTGTCCGGGGAGGAGCCGTTGAAGTTCAGGTTCGACGAGAAGACGCGCGGTTTCGTGAAAACGTCGGTGATCGAGGCGGCAATGGCCGCCGTAGATGGCGGCGAAGGGAGGCTGAGGAATTGGGTGGATCGGAGATTGAACGATTCTTTTCCGGTGGATGTTGTGGAGAAGTTGACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAGAGGCCCAACATGGGACGCGTCGCTGGCAAGATCTCAAAGTTTTATTTGACCTCTAGGAAGTGGTTCGATAGCATCAAAATGCCTGATATCACCGTTTCGTTGGGTCCTCGATAA | 1275 | 0.5569 | MCKTKMAIDAASPTRTSRTEQRANQSPRTSSSRPTPGPIASFSEKPSTSSSTTTTAPYTGSTGYRLSSDTSISSRTSLTSLRDTLPENPHIYQFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKWFDSIKMPDITVSLGPR | 424 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca10g00536 | 424 | ProSiteProfiles | Protein kinase domain profile. | 64 | 402 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca10g00536 | 424 | PANTHER | OS09G0572100 PROTEIN | 1 | 424 | - | - | |
Cca10g00536 | 424 | MobiDBLite | consensus disorder prediction | 10 | 70 | - | - | |
Cca10g00536 | 424 | SUPERFAMILY | Protein kinase-like (PK-like) | 91 | 396 | IPR011009 | - | |
Cca10g00536 | 424 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 1 | 424 | - | - | |
Cca10g00536 | 424 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Cca10g00536 | 424 | Pfam | Protein kinase domain | 138 | 392 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca10g00536 | 424 | Gene3D | Phosphorylase Kinase; domain 1 | 66 | 175 | - | - | |
Cca10g00536 | 424 | Gene3D | Transferase(Phosphotransferase) domain 1 | 177 | 411 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca10g00536 | Cca-Chr10 | 5763955 | 5765898 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca10g00536 | 87 | 408 | Receptor kinase-like Gene Family | AT1G51940 | 31.045 | 1.17e-41 | 154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Cca10g00536 | PK_Tyr_Ser-Thr | 5.1e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca10g00536 | - | - | gmx:100792694 | 665.225 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca10g00536 | 10 | 5763955 | 5765898 | Cca10g00536 | 10 | 5763955 | 5765898 | ECH |