Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00498 ATGGAAGGAAGAAGCTTAGCGGAAACACCTACTTGGGCTGTGGCTGTTGTTTGTTTTGTTTTGCTCTCCATATCTATCTTCATTGAGCACATCCTCCATCTCATAGGAAAGTGGTTGAAGCAAAAGCAGAAAAGTGATCTATACGAGTCACTTGAAAAGATCAAATCAGAGCTTATGTTATTGGGGTTCATATCGTTGCTACTAACAGTAGGACAAGGTGTAATATCGAGGATTTGTATAACAGAAAAGGTTGCCGACACATTTCACCCCTGCCCAAAGGATCATCATCAAAACACTAGTGCCCGGAGATTACTTTCCGATAACCAAAATCACCGTCGTATTTTGGCGGCCGGAGGAAGTGACAAGTGTCCTCCGGGTAAAGTCCCGTTTGTGTCATCGGAGGGCATTCATCAACTCCATATATTTATCTTTGTGCTCGCTGTTTTTCACGTCCTTTACTGCATACTTACTCTGGCTTTGGGTAGGGCAAAGATGAGAAGGTGGAAACGATGGGAAGAGGAAACCAAGACAGCAGAGTACCAATTTTCACACGATCCTGAACGGTTCAGATTTGCGAGGGAGACCTCGTTTGGGAGAAGGCACTTGAAATTCTGGACCCAAAATCTTGTCCTTGTTTGGATTGTTTGTTTCTTCAGGCAGTTCGTACGTTCAGTCCCTAAAGTAGATTATTTGACCTTGAGGCATGGATTTATGATGGCTCATTTGGGGCCTCAAAGTCACATGAAATTCGACTTTCGACAATATATCAAAAGATCTTTGGAAGAGGACTTCAAAGTTGTCGTCGAAATCAGTCCTCCAATATGGTTCATCACGGTATTTTTTCTCCTGTTTAACACTCATGGCTGGTATTCTTATCTATGGCTGCCATTTGTTCCTTTGATTATCATTCTATTAGTTGGAACCAAGTTGCAAGTGATCATAACAAAGATGGGTCAAAGAATTGAACAAAGAGGAGAGGTAGTAAAGGGCGTGCCACTAGTGCAACCTGGAGATGACCTATTCTGGTTTAAAAAACCTCGACTTATTCTCTACCTCATTAATTTTGTGCTCTTTCAAAATGCTTTTCAAATGGCCTTCTTTTCATGGACTGCGCTTCAATTTGGCGTGAAATCTTGTTTCCACTCCCATACAGAGGATTTGCTGATCAGAATCTCAATGGGGCTCTTTGTTCAATTCCTTTGCAGCTACGTGACTCTTCCTCTCTATGCTCTCGTGACACAGATGGGATCGAGTATGAAGGCAACCATATTCAGTGAAAGAGTGGCGGAGGCTATAAGGAAGTGGCACCACACGGCGAAGAAGCAGATAAAAAATAACCATGGGCTGGCCTCACAGTCACAGACCCCTTTCTCAAGCAGGCCCACAAGCCCGGCCCATCCCCTTCGCCACTACCGCAGTGAAATAGACACCTTCCTCTCATCTCCAATAAGATCCGAGTCTTTGGCCCATCAGCCCAACGACATTGATTCACTCTCATACTTTAACTCACATCATCACAGGTCCAAGGTTAATGCTGCTTCTATCTCAATTGAAATGGGTCACCTGGCCCATGATCCACCACAAAATGTGAAAGAACCCAGCTCTGCCCTTGAGGGCTCAGACCCGACTCAACACGAGAGGGAATTTTCATTTGATAAAAGATTACAAATTTAA 1674 0.4379 MEGRSLAETPTWAVAVVCFVLLSISIFIEHILHLIGKWLKQKQKSDLYESLEKIKSELMLLGFISLLLTVGQGVISRICITEKVADTFHPCPKDHHQNTSARRLLSDNQNHRRILAAGGSDKCPPGKVPFVSSEGIHQLHIFIFVLAVFHVLYCILTLALGRAKMRRWKRWEEETKTAEYQFSHDPERFRFARETSFGRRHLKFWTQNLVLVWIVCFFRQFVRSVPKVDYLTLRHGFMMAHLGPQSHMKFDFRQYIKRSLEEDFKVVVEISPPIWFITVFFLLFNTHGWYSYLWLPFVPLIIILLVGTKLQVIITKMGQRIEQRGEVVKGVPLVQPGDDLFWFKKPRLILYLINFVLFQNAFQMAFFSWTALQFGVKSCFHSHTEDLLIRISMGLFVQFLCSYVTLPLYALVTQMGSSMKATIFSERVAEAIRKWHHTAKKQIKNNHGLASQSQTPFSSRPTSPAHPLRHYRSEIDTFLSSPIRSESLAHQPNDIDSLSYFNSHHHRSKVNAASISIEMGHLAHDPPQNVKEPSSALEGSDPTQHEREFSFDKRLQI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00498 557 MobiDBLite consensus disorder prediction 443 466 - -
Cca10g00498 557 MobiDBLite consensus disorder prediction 523 557 - -
Cca10g00498 557 Pfam Mlo family 4 467 IPR004326 GO:0006952|GO:0016021
Cca10g00498 557 PANTHER MLO-LIKE PROTEIN 2 545 - -
Cca10g00498 557 MobiDBLite consensus disorder prediction 444 462 - -
Cca10g00498 557 MobiDBLite consensus disorder prediction 541 557 - -
Cca10g00498 557 PANTHER MLO-LIKE PROTEIN 1 2 545 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00498 Cca-Chr10 5206544 5227022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00498 1 468 MLO family AT2G39200 62.940 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00498 K08472 - gmx:100776714 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00498 10 5206544 5227022 Cca10g00498 10 5206544 5227022 ECH
Cca10g00498 10 5206544 5227022 Cca04g00754 04 7569844 7576270 ECH
Cca03g02357 03 44540742 44547429 Cca10g00498 10 5206544 5227022 ECH
Cca10g00498 10 5206544 5227022 Cca04g00754 04 7569844 7576270 PCT