Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00459 ATGCCGAAAATGGGACTCAGAAACATCTTCTTCTCCAAAACGACACCGTTGCCACCTCCCTCGAGGACCTTCTCAGACTCATTAATGGACGAAAACATCGAAACCGCTCGTTCCCTAATCTCCAAATGGGATCCAAATAATTCCGCTTCCGCTCCTCTTTTCAGGAACACGCGCCAAGAAGCCAAACAGTACCTTGACGCCGTCGTGAGCCTGCAAACCACTATGCAGTACCTCGTCGCACGGGATTCCTCCTCCCTCAGCCTCATCCAAGCCCAATCCCTAATGCAACTCGCCATGAACAGACTCCAGATGGAGTTCTACCGAATATTAACCCAAAACAGGGACAATTTGGATCCCGAATCCGTCGCCTCCACCGACCGCCGGAGCAGCAGCGTCTCcgacgacgacgacgacttctccgaggacgaTTTCCGCTTCGCCGGAGACTCTGTCTCCACGGTCGCCATGGCGGACTTGAAAGCCATTGCGGAGTGCATGGTCTCCGCTGGCTACAGAAAAGAGTGCGTCAAGGTTTACATTCTGATGAGAAAATCGGTCGTGGATGAGGCGCTGTATCATCTCGGAGTGGAGAGGCTGAGCTTCTCTCAGGTTCAGAAGATGGACTGGGAGACGCTCCACTCCAAGATTAAGTGCTGGCTCAACGCTGTCAAAATCGCCGTCCGCACTCTGTTTCACGCCGAGAAAACGCTCTGCGATTATGTTTTCGGTTCGCCGGAGAGGATGATCGCCGAGTCATGTTTCGCCGCGGTTTGCAGAGAAGGCGCCGCGTCGCTCTTCGGATTTCCGGAGAACGTGGCGAGGTGCAAGAAAACGCCTGAGAAAATGTTCAGGACGCTGGACATGTACGAAGCCATGTCAGAAAACTGGAACCAAATCGCGTCCATCTTCTCGTCGGAACCAACCTCCTCCGTCCGGTCTCAGGCCACCGCTTCTCTGGTGAAACTCGGCGAGGCCGTTCGGACGATGCTGACGGACTTCGAATCCGCGATTCAGAAGGAATCCTCCAGGATTCCAGTCCCTGGCGGCGGGATCCACCCGCTCACGCGCTACGTCATGAACTACATCGCGTTCCTCGCCGATTACCGCGACGCGCTGGCGGATATCGTCGCCGGTTGGCCGCAAAATCCACTGCCGGAGTCTTACTACCGCAGTCCTGATCGCGAGGAGAAGAATCGGTCGTCGGAGATAGCGGAACGGATCGCGTGGCTGATTCTGGTGGTCCTCTGCAAGCTCGACGGCAAAGCGGAGCTCTACAAGGACGTTGCGCTCTCTTACCTGTTCCTGGCGAATAACATGCAATACGTCGTCGTAAAGGTCCGCAAATCGAACCTAGGGTTCATCCTCGGGGAAGAGTGGTTGACGAAGCACGAAGCGAAGGTGAAAGAGTACGTTTCCAAGTACGAGCGCGTGGGATGGAGCAAGGCTTTCCCGTTGCTGCCGGAAAATCCAACGCCGGAGGAAGCCAGAGGAATCTTCGAGAGTTTCAACGCGGCGTTCCATGAAGCGTGTAGGGTACAATCCACGTGGGTCGTACCCGACCCGAATCTGCGAGAGGAAATAAAAGCGTCGATAGGTTTGAAGCTGGTGGCACGTTACAAGGAGATGTGCGGGAAGTATCGGGTCGGGTCGGAAACGGTATCGGGGTTTTGGAGCGAAGATATGGAGCATTACCTTGGCGAGATTTTGTGTGGGAGTGGAGAATCGCGTAGCGTTTCGTGGCGTGGTCCTTCTCCTCCTCCAATCGTAGCAAAATGA 1776 0.5411 MPKMGLRNIFFSKTTPLPPPSRTFSDSLMDENIETARSLISKWDPNNSASAPLFRNTRQEAKQYLDAVVSLQTTMQYLVARDSSSLSLIQAQSLMQLAMNRLQMEFYRILTQNRDNLDPESVASTDRRSSSVSDDDDDFSEDDFRFAGDSVSTVAMADLKAIAECMVSAGYRKECVKVYILMRKSVVDEALYHLGVERLSFSQVQKMDWETLHSKIKCWLNAVKIAVRTLFHAEKTLCDYVFGSPERMIAESCFAAVCREGAASLFGFPENVARCKKTPEKMFRTLDMYEAMSENWNQIASIFSSEPTSSVRSQATASLVKLGEAVRTMLTDFESAIQKESSRIPVPGGGIHPLTRYVMNYIAFLADYRDALADIVAGWPQNPLPESYYRSPDREEKNRSSEIAERIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFILGEEWLTKHEAKVKEYVSKYERVGWSKAFPLLPENPTPEEARGIFESFNAAFHEACRVQSTWVVPDPNLREEIKASIGLKLVARYKEMCGKYRVGSETVSGFWSEDMEHYLGEILCGSGESRSVSWRGPSPPPIVAK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00459 591 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 575 - -
Cca10g00459 591 SUPERFAMILY Cullin repeat-like 46 567 IPR016159 -
Cca10g00459 591 MobiDBLite consensus disorder prediction 118 138 - -
Cca10g00459 591 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 575 IPR004140 GO:0000145|GO:0006887
Cca10g00459 591 Pfam Exo70 exocyst complex subunit 218 547 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca10g00459 591 Gene3D Exocyst complex component Exo70 38 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00459 Cca-Chr10 4715799 4718112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00459 18 572 EXO70 exocyst subunit family AT5G59730 48.061 3.89e-178 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00459 K07195 - gmx:100801773 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00459 10 4715799 4718112 Cca10g00459 10 4715799 4718112 ECH