Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00415 ATGTCAGTGATTGTGCGTGACGAGGATGGAAGCATTATTCTTTTCTGCAAAGGAGCCGACAGTATCATATTTGATCGACTGTCTAAGAATGGAAAAATGTATTTAGAGGCTACAACTAGACATTTGAATGAATATGGAGAAGCAGGTTTGAGAACACTTGCCCTGGCTTACAGAAAGCTTGATGAACAAGAGTACTTTGATTGGAATAACAAGTTTCAGAAGGCCAAGACAGCTGTTGGGCCTGACAGAGATGCAATGCTTGAGCATGTCTCATATTGGTTGTGGCAAGGTTACCTATTCTTGATGGTGGATTGGAAATGCTCCCATTTTGCCCTTGAGCTCTTCAACGAACTACCTCTCTTGCTACATGGTTTCACGTTGTTCTTGGAGTAA 393 0.4198 MSVIVRDEDGSIILFCKGADSIIFDRLSKNGKMYLEATTRHLNEYGEAGLRTLALAYRKLDEQEYFDWNNKFQKAKTAVGPDRDAMLEHVSYWLWQGYLFLMVDWKCSHFALELFNELPLLLHGFTLFLE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00415 130 Gene3D - 1 90 IPR023299 GO:0000166
Cca10g00415 130 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 68 IPR023299 GO:0000166
Cca10g00415 130 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 94 - -
Cca10g00415 130 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00415 Cca-Chr10 4304657 4305641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00415 1 91 Primary Pumps ATPases AT3G13900 78.022 8.81e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00415 K01530 - ccaj:109805671 186.422