Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00394 ATGGCTTCATCCAACCTCAAGTCAACGTTCCTCGTTTTGTGTCTCTTGGCCTGGCTCCTCTATCCGATCAACGCTCATGGAGGAGGCAGTGATCACGAGGATGAATCTGGCAGTGAAGATTTGCATTCGAGGGATCTGAGAGTGGTGAAAATATGGTGTTTGGTAATCTTCTTCGTGAGCACTTTCGTTGGTGGTGTGTCTCCCTACTTCTACCGTTGGAACGAGGCTTTTCTTCTTTTGGGGACTCAGTTCGCTGGTGGGGTTTTCTTGGGAACCTCTTTGATGCATTTCTTGAGCGATTCCAATGAGACCTTCCGAGATCTCACCACCAAATCTTACCCTTTTGCCTTCATGCTCGCTTCATCCGGATACCTTCTCACCATGCTTGCTGACTGCGTCGTGGTTTTTGTCACCACCAACAGCAAGAGGGAGGCCAAAGTGGTGGAACTCGAAGGAGGGGTAACACCCCAAGTCCAAGAGCATGATGACCATGTCCATGCCAGAGTGGAGACAACAAACCCTGTCTTGTTGAAGACTTCTTCTGTCGGAGACACCATTCTGCTCATCCTTGCACTGTGTTTCCATTCTGTTTTTGAGGGCATTGCAGTTGGAATTGCAGGTACTACGACAGACGCATGGAGGAACTTATGGACAATATCCTTGCACAAGATATTTGCTGCGATTGCAATGGGAATTGCTTTACTAAGGATGTTACCTAAGAGACCCTTTTTAACAACGGCAGCATATTCTTTTGCCTTTGCTGTGTCTAGCCCCATTGGTGTGGGGATTGGCATTGCCATAGATTCCACAACACAAGGACGCACTGCAGATTGGATGTTTGCTATATCTATGGGTATTGCTTGTGGGGTTTTCATCTATGTTGCCATCAATCATTTAATAACCAAAGGCTTCAAACCGCAGAAGACAACACGTTACGACACTCCCTGGTTTAGGTTTGTCGCTGTGCTTTTTGGTGTAGCTGTTATAGCAGTAGTCATGATCTGGGACTGA 1011 0.4698 MASSNLKSTFLVLCLLAWLLYPINAHGGGSDHEDESGSEDLHSRDLRVVKIWCLVIFFVSTFVGGVSPYFYRWNEAFLLLGTQFAGGVFLGTSLMHFLSDSNETFRDLTTKSYPFAFMLASSGYLLTMLADCVVVFVTTNSKREAKVVELEGGVTPQVQEHDDHVHARVETTNPVLLKTSSVGDTILLILALCFHSVFEGIAVGIAGTTTDAWRNLWTISLHKIFAAIAMGIALLRMLPKRPFLTTAAYSFAFAVSSPIGVGIGIAIDSTTQGRTADWMFAISMGIACGVFIYVAINHLITKGFKPQKTTRYDTPWFRFVAVLFGVAVIAVVMIWD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00394 336 PANTHER ZINC/IRON TRANSPORTER 25 335 - -
Cca10g00394 336 PANTHER ZINC TRANSPORTER 11 25 335 - -
Cca10g00394 336 Pfam ZIP Zinc transporter 49 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00394 Cca-Chr10 4125411 4127599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00394 22 336 Inorganic Solute Cotransporters AT1G55910 57.492 9.61e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00394 K14709 - gmx:100788541 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00394 10 4125411 4127599 Cca10g00394 10 4125411 4127599 ECH