Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00363 ATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCACAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGGTCATCAAGCGGCCTTGGAATTGAACCTGCCATTGCTACCAATGTGGATGTCTCAGTCAATTTGATAGAACCTAAAACTATCCCTGCACAACCTTTAGTTGCTTCAGGTTCAGAGGAGAGTGACGAGGTGAAGCCCAAGGATGGTCCAAAACGATGCAGCAACTGCAATAAGCGGGTTGGTTTAACAGGATTTAATTGTCGATGTGGTAACCTTTTCTGTGCCACACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTATCGCACTGCTGCACGGGATGCCATAGCTAAAGCAAATCCGGTTGTCAAGGCTGAGAAACTTGATAAAATCTAG 429 0.4476 MNMCSKCHKDMMLKQEQAQLAASSIGNIMNGSSSGLGIEPAIATNVDVSVNLIEPKTIPAQPLVASGSEESDEVKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCATHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00363 142 Gene3D - 61 138 IPR035896 -
Cca10g00363 142 Gene3D - 1 32 - -
Cca10g00363 142 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 142 - -
Cca10g00363 142 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 142 - -
Cca10g00363 142 SUPERFAMILY AN1-like Zinc finger 66 137 IPR035896 -
Cca10g00363 142 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Cca10g00363 142 Pfam AN1-like Zinc finger 83 119 IPR000058 GO:0008270
Cca10g00363 142 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00363 Cca-Chr10 3831539 3831967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00363 1 142 C2H2 Transcription Factor Family AT3G52800 39.333 2.48e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00363 - - gmx:100781607 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00363 10 3831539 3831967 Cca10g00363 10 3831539 3831967 ECH
Cca10g00363 10 3831539 3831967 Cca04g00564 04 5663690 5664091 ECH
Cca03g01991 03 39948224 39950879 Cca10g00363 10 3831539 3831967 ECH