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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca10g00357
ATGGAGTCAGATCTCGAGCAACAAGCTCCGGTGAATTCTTCGGGTTTGACACGGTACCGATCGGCGCCGAGCTCTTATTTCTCCAACATCATCGACCGCGAGTTCTACGAGCACATTTTCAACCGTCCCTCGAGTCCAGAAACTGAGCGAGTCTTCTCGGGCTTCATCAACAGCTTAAGCGCCGATGCTGCACCGgaagaacaagaagaagaaaaagaaaaagaagaagaagaTTCGCTTCATCGCAAGCTCTCAACTGATTCCGCTATTAAGGAAGAAGAGGTTAGCAACCCGCAGGAACACGTGGCGCTTCACGGGACCAATAGTAACATGAGTGCTTATAACTCAGCTTCTCATCATTTCTTCCAAACCTCTTCCAAACCACCTTTGCCCAACCACAACAACTTTCCCTCGGCTATGGAAGGAACGTATTCAATGGGACTCAGAAATAATTCTAACCTTATCCGCCACAGTAGTTCCCCTGCTGGACTATTTTCCCAAATTAACATTGAAAATGTGTATGCTGGAGTGAGAGGCGTGGGGACCTTGGGGGCGGTTAATAACAGTGTTGAAGAAGCGAAATTTTCTGCATCGAGGAGGTTGAAGAATCAACAGAATTTTGGGTCGGGGCGAATGTCGTCCATAGCTGAAATTGGGGACAGGAATAGAGAAGGTAGTCCTGATAATGAAGGTTTTGTTGATGGTGGTAACGATTTTATGGCTGGTTTTCAAGGTGGTGGTCATTGGGATGATTCTGCAATGATGTCTGACAACGTGGGTGGTGTGAAAAGATTTAGAGAAAACGATGGAAAACCATTTTCTGGAGCTGAGACTCAGAATGAAACGGGACAGAATCCTGGTCCTTTGGCCCATCAAATGAGTTTGCCGAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTTCTGCACTTTTCAGATTCAGTTCCGTGCAAAATTCGTGCCAAGCGTGGCTGTGCCACTCACCCTAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGCGAGCGTATGAGGAAACTTCAAGATCTTGTCCCAAACATGGACAAGCAAACAAACACGGCAGATATGTTGGACTTGGCTGTGGATTACATCAAAGACCTTCAAAAGCAAGTTCAGACGCTTTCAGACGTTCAAGCTAAGTGTACGTGTTCACATGAGAAGCAACAATAA
1194
0.4481
MESDLEQQAPVNSSGLTRYRSAPSSYFSNIIDREFYEHIFNRPSSPETERVFSGFINSLSADAAPEEQEEEKEKEEEDSLHRKLSTDSAIKEEEVSNPQEHVALHGTNSNMSAYNSASHHFFQTSSKPPLPNHNNFPSAMEGTYSMGLRNNSNLIRHSSSPAGLFSQINIENVYAGVRGVGTLGAVNNSVEEAKFSASRRLKNQQNFGSGRMSSIAEIGDRNREGSPDNEGFVDGGNDFMAGFQGGGHWDDSAMMSDNVGGVKRFRENDGKPFSGAETQNETGQNPGPLAHQMSLPNTSAEMAAIEKFLHFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDVQAKCTCSHEKQQ
397
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca10g00357
397
MobiDBLite
consensus disorder prediction
264
287
-
-
Cca10g00357
397
MobiDBLite
consensus disorder prediction
1
20
-
-
Cca10g00357
397
PANTHER
TRANSCRIPTION FACTOR BHLH FAMILY-RELATED
13
394
-
-
Cca10g00357
397
MobiDBLite
consensus disorder prediction
75
96
-
-
Cca10g00357
397
MobiDBLite
consensus disorder prediction
273
287
-
-
Cca10g00357
397
SMART
finulus
331
381
IPR011598
GO:0046983
Cca10g00357
397
PANTHER
TRANSCRIPTION FACTOR BHLH83-RELATED
13
394
-
-
Cca10g00357
397
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
328
388
IPR036638
GO:0046983
Cca10g00357
397
Pfam
Helix-loop-helix DNA-binding domain
330
376
IPR011598
GO:0046983
Cca10g00357
397
MobiDBLite
consensus disorder prediction
44
96
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca10g00357
Cca-Chr10
3776902
3780272
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca10g00357
4
392
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT1G51140
39.461
1.11e-73
233
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Cca10g00357
HLH
5.1e-10
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca10g00357
-
-
ccaj:109806502
703.36
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca10g00357
10
3776902
3780272
Cca10g00357
10
3776902
3780272
ECH
Cca10g00357
10
3776902
3780272
Cca04g00556
04
5506554
5510904
ECH
Cca02g00779
02
20638498
20642461
Cca10g00357
10
3776902
3780272
ECH
Cca03g02001
03
40130575
40133282
Cca10g00357
10
3776902
3780272
ECH
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