Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00345 ATGGATCCAGAAAGATCAATAGAGGACCAATTCTCCAAGCTACACCCTTCCATGCCAGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCATATCAGCTGCATACGCACTGGTCAGGCTTGGTTATAACAATATCACTGTCTTAGAGAAACATCACACAGTTGGTGGCATGTGTGAATCTGTAGAAATTGAAGGAAAAGTTTATGATCTAGGTGGCCAAGTTCTGGCCGCAAGCAGTGCTCCAGTCATCTTTCAATTGGCAAAAGAGACAGGCTCTCCACTAGAAGAAATGGATTCCCACAAGCTAGCTGTTATTGATAGTTCCACTGGAAAGTACCAAGATGTTAAAGTTGCTGATGATTATGTATCTGTCATGTCACTTACATTAGAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTGGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTAGCTCCAGATTATGTTGAGCGTCATGGGCTCAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCCTACATTCATGAATTCACTAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGCCTTTGGCAGAGAATTGCTGAATCAATTCCTATAAAACTTCACTGTAACACTGAGGTGTTGGCAATCAAGAGGAACTCTGACTGTGTCAATGTTAATGTCAAGGGCCGAAATGAAAGTGAAACTATGGAATTTGATAAGATCATCATCTCGGGTAACTTTCCTTTAAAATATGGAAGAACATATAGATCAGTGCCTTCAACTTGCATAGAGTGTGAAACAGAAGTAATGGATGTAAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACAACTGTTTTAAAGATCAAAGGGCTAGAACATATGCCTGTTGGATTTTATTATTTTAATGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCTGACACTAACATATTCTTGTTCTGGTCCTATGGAAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAATAGAATCCATGGGGGGTGAGGTTGAGAATTTCATTCTTCAACGTCGATTTAAGTATTTTCCTCATGTTAGCAACCAAGATATGAGAAACGGGTTCTATGAGAAGTTGGAGTCAGAACTTCAAGGTTCAAGGAATACTTATTATGTTGGAGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGGTTTGATCTGCAAGAACTTTGCAAATAAAAGTGATTTACCAATATTTCCTTACACCAAGAGTTTGTTTCCCATGCAAACTGAGTTCCAGAAAAAGGAGCCTAAACAACTAGATGAATTGACTGGAGTGCAATTTCCCAATTTGCCTACTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTAACTCAAAGCAGAACTCTTTATACTTGGATAAATGAAGGAGGGGCAGTGGCTGGCAAGAGGACTTATGAAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAGCCCGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGCCTAGATTTCATTGATGCCTTCTTTGGGTGTCTAAGAGCTAAAGTTTTACCAGTTCCAGTTCTTCCCCCGGATCCCATGCAGAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTAGCAATTTTATCAACGGTAGGTTACCACTCAGCAGTGCGTGCAGGACTAGTGAAAAGTTTGATCACATTAACTGGAAAAAGTGGGAAATCCACAGCTCAATGGCCTAAACTTCCCTGGCTGCACACTGATACTTGGGTCAATAACTCAAGAAATTTGGCTAAGGAAGATGCTGATGATCAATGTGAATCTCACCCTGGTGACATATGTTTCCTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTGAAGTTGATGAGAAGTATATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTGCTGTTTTCACCAATGACATTTATTAAGAAACCACTCTTATGGCTTGAAACAATCAGCAAGTATAAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGCTGGTGGTTCGAAGGTTAGAGTCTGAGAAAGACAAGCTTCAGAGTTTAGACCTTTCATCCATGATTTTCCTTATGGTTGCTGCTGAGCCAGTAAGGGTGAAGACCTTGAAAAAATTTCTCGAGTTAACATCTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAACTGTGTGTTTGTCAGCTGTGCTTTTGGAGAAGGTTGTCCAATTGTTGTTGACTGGCAGGGAAGAGTTTGCTGTGGATATGTTCATCCAGGTGATGCAGATGTTGACATCCGAATAGTTGATCCAGAGAGTGGTGAAGAGCTTGAGGAAGATGGAAACGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCAGGAATAGGATACTGGGGGAAAGAAGAAATGAGTCAGAAAACTTTTAGAAATGAGCTTCAAAACCATCCTGGACGTATCTACACAAGAACTGGAGACTTGGGAAGAATAATAGAAGGGAAGCTATTCATCACTGGGAGAATCAAAGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACAGTTGAAAGTTCATCTGAATTTCTTCGTCCGGGGTGTTGTGCAGTCGTTGGTGTTCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCCTGCCAGATGGTTCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAGCAGTTAGCAAAGATGTGATCGAACACATTCAGACTCGTGTGGTTGAAGAACATGGAGTCACTGTTGCTGCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACCTCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGAAACACTGAACTTGGTGCCACAGCCTATTTTGACAAGGAAATCACTAGTGAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCCCGAGCACACTTGGTGAGAAGTGGTACACCTCAACCTATTGCAAGAATCGGTAACAAGGAAATTGTGGAACAATTGAAAAGGCTTATTTCTGAGCAGTCTGGAATCCCAGTCAACAATATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCTTGGGTGTGCCAGTTGCGGCTATAGATGTTTTCACTGCATCATGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTCTACTTAAGTCTCAACCTCAACTTATGAGCAATTCATCCCATGCTCAAGAAGCTGAATTTGATTACACTGAAGTGGTTGTTGATGTGTCCAATTCTCGCCAATGGGGTATCCGTTTACTTCAACTCCTAGCACTTATTTATATCTCTATCATGCTGGTCTCTCCTGCTTATCTATCCATCACTACTTTTCTAAGTTTCATACCAAATGTGAGTGATTCGGTATATGGAATGCCTTGGTCAAACTATTTGTTTTCCTTGGCTTTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTTTACTTGCATTTGCATTTCAATTTTCGGGAATTCCTTCTTGAGACCAAACTATGCCCTTACACCCGAAGTATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTATATAAAACTCAGGAGATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCGAGAATTGGATCCTCAGTTTTGCTAGACACAGTTGATATCACAGACCCATCTTTGGTTTCAGTAGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAGTTCTAAGTTTCCATCCTATTAGGATCGGTAAAAACTCTTCAATTGGACCTTATGCTATTATTCAAAAAGGAAGTGTTATCAGAGAAGGATCCGAGGTACATCCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCTTAAACCTGCTAAGCTTAATAATGTTAAAGAGAATGCAGTGTTGCTTGTCACTACAGGCAAAAGTCAGTCTAGTGCCATTTACCATTTTCTGGGGATATATCTCACTGGCTTTCTCAGCTCCCTTGCCGCAGCTATTGCTTACATCATGTATATAAGGTTCTTCCAGATACCTGCATCATTCCAACACTACTCATTTGTTTGCATATGTGGTGCCTTCCACTGGATCCCCTTTACCATTGTTGCATATGCCACCATGTTTTCTGATGTACCATCAAATCCCATTGCCTTTACCATATCATTTACCTGCGCATACTTGCTTCATGGTCTCATACTCACCTCTCTCACATGTGCTTTGACCCGTTTGCTCAAATTAAATCAAAACCAAACCCATTTTAAAACCTGGCTTCGACACCAATTGACCATTTCCTGCCACCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGTCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCTGAGTTAATGTCAATAGGTGATGGTGTCCATCTTGGTGACTTTAGCAGGATCATCACTGGTTTCCACTATTCCAACGGATATGCTTGTGGAGAAATACAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCATAATCCTCCCAGGTTCTGTTTTGGAAAAGAATGTCATTTTAGGTGCACTTTCAGTTGCTCCAATGAATTCCATTCTCCATGAGGGTAGCGTGTATATTGGATCTCAAACAAGAGTTGCAACCAGGAACTCTTCAATTGCTTTAGATGAACGGATAGAGGAGATGGACATGGAATACAAGAAAGTAGTTGCAAATATGGCTGCAAATTTAGCTGTCACAACTATTAATGTCAAAGCAAGATACTTCCATCGCATTGGTGTTGGTGGAAAGGGGCACTTGAAAATCTATGACAAACTCGAGGGCATTCCAATGCACAAGATTTTTCAACCTGGAAAGAGCTACCCTATCATGGTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATCGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGATGCACCAGATTCTAACCATGCTCCCGTGATTGACCTCACACTAAAAACTGGAAACGCATTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCGAGGGAAGAACTTGTCAAGAAAGCCCCTCATGTTCGTGAAGCAGTGTGGAATTCCCTTAGACATGCTCACTCATATGCTGAATTGCATTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGGCCTATTGACAAAACCATTAGTGAGGACACAGGTAAGGTTGAACCAATTGGAATCCTTCCACCAGAAACAGGTGCAATTCCTAGGGATGAAAATGACGCACGTCCCTTACTTTTCCTTGCTGAAGATTTTCAAAAGCGCGTGAATTCCCCAAGTGGAGTTCACTATATCTTTCAAGTGCAACTTCGAGCAGTGCCACATGATGAAGCCACACGTGACATTGCCCTAGACTGCACCAAACCATGGGATGAGAATGAGTTCCCTTACATTGATGTTGGAGAGATACACATCAAAGAGAATCTCTCCATGGAAGAAACAAATGCGCTTGAATTCAACCCTTACCTCAAAAGCCACGAGTTGGATGTGATCCCTGCCACTTCCAAAACGCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGTAATAGACAGCCTCTCCCAGAATCTTGGAGGAACCTCGTAGAGCAATCCATCGTTAAGGTGGACTTGTCATGTTGTCCCGTGGCAGCATCATTGCCCAAAAAGGAGCCAAAAAAAGTGATAACAACGACAACAACCACCTTAACCTTGACAAGAACATGGTACCAAACCTTCTCAGCACTCTTCACTCAACCGTTGCTACAAACGGTTTTGCCTTTCATGGTGTTAGGTTTAGCCGTTTTTGCTCCTTTGAGCTTTGTTGTCAACCTCAAGAACGTGGAGAAACTCCAAGTGCAATGGTTGCTTCCTTTGTTTTGGATTCTCTCAGGTGTCATGGCTGCACTTGCATGCGTTGTGGCAAAATGGGTTCTCGTGGGAAGGAAGAGAGAAGGTGAAACCATACCCTTGTGGGGCAAAAGGGTCGTCATGGATAGCACGTGGCAAGCCATTAGAACCCTTGTTGGGGACTATTTCATGGACATGGCATGTGGGTCGTTTGTGTTTGTAATGTGGATGAAGATGATGGGTGCGGACATAGACATGGATGGAGTTTACGTGGACAGCGTGGGGGCATTGTTGAACCCTGAAATGGTGCAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAGGCTTTGTTGTTTGGACACATATATGAAGGTGATGAAGGTGGCATGGTGAAGTTTGGAGGAATCAGAATAGGTGAAGATGGGTTTGTGGGAAGTAGAGCAGTAGCCATGCCTGGGGTTCATGTGGAGAATGAGGCCAATCTTTCTGCATTGTCACTAGCCATGAAAGGAGAAATAGTTAGGTCTAGATAA 6984 0.424 MDPERSIEDQFSKLHPSMPVNTRIGIVGAGPSGISAAYALVRLGYNNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFQLAKETGSPLEEMDSHKLAVIDSSTGKYQDVKVADDYVSVMSLTLEIQEKVKNSGRLGVHAVSEVASDLAPDYVERHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESIPIKLHCNTEVLAIKRNSDCVNVNVKGRNESETMEFDKIIISGNFPLKYGRTYRSVPSTCIECETEVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFNEYMEDPSTIGNPVAMQKFYADTNIFLFWSYGNSADIKGPTVTELAIKSIESMGGEVENFILQRRFKYFPHVSNQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMGLICKNFANKSDLPIFPYTKSLFPMQTEFQKKEPKQLDELTGVQFPNLPTLNSYLKHWGTHPVTQSRTLYTWINEGGAVAGKRTYEEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVGYHSAVRAGLVKSLITLTGKSGKSTAQWPKLPWLHTDTWVNNSRNLAKEDADDQCESHPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSIYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYKATHSAGPNFAFELVVRRLESEKDKLQSLDLSSMIFLMVAAEPVRVKTLKKFLELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGCPIVVDWQGRVCCGYVHPGDADVDIRIVDPESGEELEEDGNEGEIWISSPSAGIGYWGKEEMSQKTFRNELQNHPGRIYTRTGDLGRIIEGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVVGVPEEILSAKGISLPDGSDQVGLVVVAEVRDGKAVSKDVIEHIQTRVVEEHGVTVAAVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPILTRKSLVRSFTTGTCREGRTPRAHLVRSGTPQPIARIGNKEIVEQLKRLISEQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLMSNSSHAQEAEFDYTEVVVDVSNSRQWGIRLLQLLALIYISIMLVSPAYLSITTFLSFIPNVSDSVYGMPWSNYLFSLALAPLSWILCMVFTCICISIFGNSFLRPNYALTPEVSIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSVGDEVAIAEGVLVQSHEVKNGVLSFHPIRIGKNSSIGPYAIIQKGSVIREGSEVHPLQKVEGGQHVLKPAKLNNVKENAVLLVTTGKSQSSAIYHFLGIYLTGFLSSLAAAIAYIMYIRFFQIPASFQHYSFVCICGAFHWIPFTIVAYATMFSDVPSNPIAFTISFTCAYLLHGLILTSLTCALTRLLKLNQNQTHFKTWLRHQLTISCHLRFAKLLSGTEVFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHYSNGYACGEIQVQDNSVVGSQSIILPGSVLEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSSIALDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVGGKGHLKIYDKLEGIPMHKIFQPGKSYPIMVRHSNSLSADDDARIDARGAALRILSDAPDSNHAPVIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKKAPHVREAVWNSLRHAHSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDKTISEDTGKVEPIGILPPETGAIPRDENDARPLLFLAEDFQKRVNSPSGVHYIFQVQLRAVPHDEATRDIALDCTKPWDENEFPYIDVGEIHIKENLSMEETNALEFNPYLKSHELDVIPATSKTQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVEQSIVKVDLSCCPVAASLPKKEPKKVITTTTTTLTLTRTWYQTFSALFTQPLLQTVLPFMVLGLAVFAPLSFVVNLKNVEKLQVQWLLPLFWILSGVMAALACVVAKWVLVGRKREGETIPLWGKRVVMDSTWQAIRTLVGDYFMDMACGSFVFVMWMKMMGADIDMDGVYVDSVGALLNPEMVQIERGGCVGREALLFGHIYEGDEGGMVKFGGIRIGEDGFVGSRAVAMPGVHVENEANLSALSLAMKGEIVRSR 2327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00345 2327 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Cca10g00345 2327 PRINTS Adrenodoxin reductase family signature 23 45 - -
Cca10g00345 2327 PRINTS Adrenodoxin reductase family signature 47 60 - -
Cca10g00345 2327 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Cca10g00345 2327 SUPERFAMILY Trimeric LpxA-like enzymes 1346 1443 IPR011004 -
Cca10g00345 2327 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Cca10g00345 2327 Gene3D Catalase core domain 1713 2066 - -
Cca10g00345 2327 Gene3D - 1121 1191 IPR036736 -
Cca10g00345 2327 SUPERFAMILY Acetyl-CoA synthetase-like 493 1078 - -
Cca10g00345 2327 Gene3D - 94 202 - -
Cca10g00345 2327 Gene3D - 953 1080 IPR045851 -
Cca10g00345 2327 Gene3D Hexapeptide repeat proteins 1358 1463 - -
Cca10g00345 2327 SUPERFAMILY Trimeric LpxA-like enzymes 2234 2320 IPR011004 -
Cca10g00345 2327 Gene3D - 303 396 - -
Cca10g00345 2327 Pfam AMP-binding enzyme 525 958 IPR000873 -
Cca10g00345 2327 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Cca10g00345 2327 PANTHER AMINE OXIDASE 1 2327 - -
Cca10g00345 2327 ProSiteProfiles catalase family profile. 1685 2327 IPR018028 GO:0004096|GO:0006979|GO:0020037
Cca10g00345 2327 Gene3D - 479 952 IPR042099 -
Cca10g00345 2327 PANTHER AMP-BINDING ENZYME 1 2327 - -
Cca10g00345 2327 Gene3D - 23 446 IPR036188 -
Cca10g00345 2327 SUPERFAMILY ACP-like 1122 1201 IPR036736 -
Cca10g00345 2327 SUPERFAMILY Heme-dependent catalase-like 1733 2058 IPR020835 GO:0020037
Cca10g00345 2327 CDD FAAL 499 1072 IPR040097 GO:0008610
Cca10g00345 2327 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Cca10g00345 2327 Gene3D Hexapeptide repeat proteins 1579 1712 - -
Cca10g00345 2327 SUPERFAMILY Trimeric LpxA-like enzymes 1596 1724 IPR011004 -
Cca10g00345 2327 Pfam Phosphopantetheine attachment site 1126 1191 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00345 Cca-Chr10 3667591 3676046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00345 676 991 Monolignol Biosynthesis Gene Families AT1G20480 27.129 4.35e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00345 - - cam:101501314 3873.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00345 10 3667591 3676046 Cca10g00345 10 3667591 3676046 ECH
Cca10g00345 10 3667591 3676046 Cca04g00548 04 5434327 5443116 PCT