Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00309 ATGGGGAGAAATATGTGTTTGGTTTTGGTACTAGTGGGTTTTGTTGTGGTGAGCATTATGTGTTGTGGGGTGGCAGATGCAGCGGTGAAACCTCCACTGAAATGGCATTACTATAAGGTGACGAATACATGCGACGACGCTGAGGAGTATGTTCGCCACCAAGTAAAGGTGTTTTGGGAGAATGACAGGAGCCTTACGGCCAAGCTCCTTCGCTTGGTTTATTCAGATTGTTTTGTCACTGGATGTGATGCGTCAATTCTGCTTGACGAAGGAGAAAATACGGAGAAAAAAGCGCCACAAAACCGAGGACTTGGAGGATTTGCAGCCATTGATAAGATAAAAAGTGTTCTTGAATCACGATGCCCAGGAGTAGTCTCGTGTGCGGATATACTTCACCTGGCCACAAGGGATACTGTTCATTTGGCAGGTGGACCATCTTACCCAGTATTCACAGGAAGAAAGGATGGGATGGAATCGAATGCTGCATCGGTAGACGTGCCCTCACCATCCGTCTCGCTACAACAAATTCTTCAATATTTCCAATCCAGGGGCTTGAATGAATTAGATGCAACAACACTACTAGGAGCACACACAATGGGACGAGCACATTGTAGTTATATTGTTGATCGGCTGTACAACTACGGTGGTCCCGGTAAACCCGACCCAAGCATGGATGCTACTTTACTAGATACATTGAGAAAAGCTTGTCCGCCAAGAAAGAAGGGACAACCAGACCCTCTGGTATACCTAAACCCAGAATCTGGATCAAGTTACAACTTCACAGAATCATACTACAGAAGGATCCTATCTCACCAAGCTGTCCTGGGAATTGATCAACAATTACTATATGGTGATGACACTAAACAGATCACCGAGGAGTTCTCCGCTGGATTTGAAGATTTTCGGAGATCTTTTGCTGCATCAATGTACAAGATGGGGAATTTCAAGGTTTTAACAGGAAACCAAGGAGAGATACGCCGAAATTGCCGATACACAAACAAGGGCAACCCAAATTAG 1017 0.4503 MGRNMCLVLVLVGFVVVSIMCCGVADAAVKPPLKWHYYKVTNTCDDAEEYVRHQVKVFWENDRSLTAKLLRLVYSDCFVTGCDASILLDEGENTEKKAPQNRGLGGFAAIDKIKSVLESRCPGVVSCADILHLATRDTVHLAGGPSYPVFTGRKDGMESNAASVDVPSPSVSLQQILQYFQSRGLNELDATTLLGAHTMGRAHCSYIVDRLYNYGGPGKPDPSMDATLLDTLRKACPPRKKGQPDPLVYLNPESGSSYNFTESYYRRILSHQAVLGIDQQLLYGDDTKQITEEFSAGFEDFRRSFAASMYKMGNFKVLTGNQGEIRRNCRYTNKGNPN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00309 338 Pfam Peroxidase 51 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PANTHER PEROXIDASE 61-RELATED 17 331 - -
Cca10g00309 338 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PANTHER PEROXIDASE 25-RELATED 17 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g00309 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cca10g00309 338 Gene3D - 37 333 - -
Cca10g00309 338 CDD secretory_peroxidase 33 332 IPR033905 GO:0004601|GO:0042744
Cca10g00309 338 Gene3D Peroxidase, domain 2 167 312 - -
Cca10g00309 338 SUPERFAMILY Heme-dependent peroxidases 39 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00309 Cca-Chr10 3279359 3281356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00309 11 336 Peroxidase AT5G24070 64.653 6.45e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00309 K00430 - gmx:100820410 560.066