Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00293 ATGTGGAACATCGTACGTGTTTTCTGGAAACATGACCTCTCACCATCAATTGGGAAACATGTTGGAAAGGTGAATGTGAAGGATGTTTATCAAGGCTGCTGCCTCTGCAATGGCGTACCAGACCCCCGATCAAGATTCAGGATCCGACCCCAAGACCCCCACGCGCCTCTACAACCCTTACAAAGACCTCGAAGTCCCCATTCGCAACCTCTACCACCTCCCAACCTCCCCCGAATACCTCTTCGTCGAGGAGGCTCGCCGCAAGCGCCGATCCTGGGGCGAGCCCCCCCCTTCTCCCccggctgcggctccctcgccggcgccgttgccggagccgcctccggcCTTGTTGACGGCGTCAAATCCTTCGAGTCCGGCGACACCACCAAGCTACGCATCAACCGCGTCCTCAACTCCTCCGGCCACGCTGGCCGCGCCTGGGGAAACCGCCTCGGCGTCATCGGCCTTCTCTACGCCGGCATCGAGAGCGGGATCGTGGCGGCGCGGGACACCGACGACGTCTGGAACAGCGTCGCCGCCGGACTCGGCACCGGCGCGCTGTACCGCGCCGCGAGAGGGGTGCGATcggcggcggtggcgggtgccgtcggcggcgtcgTGGTTGGAGTTGCTGTTACGGCGAAACAGGCGCTGAAACGCTACGTACCGATATGA 675 0.5378 MWNIVRVFWKHDLSPSIGKHVGKVNVKDVYQGCCLCNGVPDPRSRFRIRPQDPHAPLQPLQRPRSPHSQPLPPPNLPRIPLRRGGSPQAPILGRAPPFSPGCGSLAGAVAGAASGLVDGVKSFESGDTTKLRINRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00293 224 MobiDBLite consensus disorder prediction 56 80 - -
Cca10g00293 224 MobiDBLite consensus disorder prediction 45 93 - -
Cca10g00293 224 PANTHER BNAA06G11810D PROTEIN 93 222 - -
Cca10g00293 224 Pfam Tim17/Tim22/Tim23/Pmp24 family 101 207 - -
Cca10g00293 224 PANTHER TIM23 93 222 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00293 Cca-Chr10 3170213 3174489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00293 54 224 Chloroplast and Mitochondria Gene Families AT1G72750 57.310 2.16e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00293 K17794 - gmx:100813158 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00293 10 3170213 3174489 Cca11g00363 11 4756605 4757826 PCT