Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00283 ATGATGAGAGAAATAGCACGTGGGGTTGTTGATGATCGAGATAGAATGGTGACTAAGAGTGATGTTATCACTGCCTTGCGCTACAGCATTGAGAAAATGGTTTGTGCATCCAGAGATATCATTCAAATATTAAGTAGGATTTCCTTTGAAGGCTTGGATGACCAGAGGATGCATTTAGTCACGAGGATGAAAGATATTGCACATGGGATTATTGATAAACAACCTAGAGTTGCAATAGCTAGGCCTGATTTACTTGCAGAACAAGTTGGCTTTGTGGATGAAGGGATGAGAGATAGTCCCTTGGTTGAGTCAACAAAGATCAGCAATGGGGACGCCCTGATTGATGGGGCACAAAGCATGACTAATGAGGACGAGATGTTGGATGTCGATCATGTATTAAGGTTTGAAAATGGGATAGATGAAGTGCAGGAGTCTTTGTTACCTTGCTTTCAGCAATTTGTTATGTGGCCCCCAGATGATTGCATCACCTTAGAGTGGGTTCAGGACATGATGATCATCCTTGAGCAGGCTTCACAGAAGATGTTGTCATCTGAATTCTGTCATGTTGTGCCTACCATGTTTGTGGAAAAATTGGTGGATGGTGTTTGTAGTATTTTATGTAAAGAACCAAACTGTGTGGATATTAATTGTCAAGGAGAAGATTCAAGAGTCATTGTAGTAGGTGATATACACGGGCAGTTTCATGACTTAATGTTGCTTTTGAAGCATGCAGGTGTGCCCTCTGAGAACCAGATTTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGAGTTGAAGTGCTTTTGGTCTTGTTGGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTTCGTGGAAATCATGAATCAAGATATTGCACTACAAGATATGGTTTTAAGGAGGAGGTGTGGTCCAAATATGGTGATCAAGGTGAAGATGTCTACAGTAAATTCTTAGAGTGTTTCAAGGAGCTTCCATTAGCATCAGTTATTGCCAACTGTGCTTATACTACTCATGGAGGACTTTTCCGTAGTATAGATGCAGCATCTTCACAGAAACCAAAACGGAATAAAACACACAGGGTGGATCTTGGTTCTTTAGCTGAGTTATCTGAAGTTAAAAGATCTTGTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGATGTTCTCTGGTCAAAACCATCTAACAAGGATGGTCTGAGGGATAATACAGGTCAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACCGAGGCATTCTTAAAGCAGAACAACTTAAAGCTGATTATCAGATCACATGAAGGACCTGATGCAAGGGCTGGAAGAGATGATGATTTTGGGGATATGTTTAGTGGATACAGCATAGATCATGATGGAGAATCGGGAAAACTATATACACTTTTTAGTGCTCCACACTATCCACAGTTTGGTAAAACGATATATAACAATAAGTGGGCATATGCAGTATTGAAGTCCCCTGACTTTGGAAGTCCTTCCTTTCACTCATTCAAAGCAGCAGAAAGACCAATGGTAATGTTTTCTTATCAAGTTGACATACAAATTCTAAATGGCTTGTATTCTTTTCTACTGTAG 1611 0.401 MMREIARGVVDDRDRMVTKSDVITALRYSIEKMVCASRDIIQILSRISFEGLDDQRMHLVTRMKDIAHGIIDKQPRVAIARPDLLAEQVGFVDEGMRDSPLVESTKISNGDALIDGAQSMTNEDEMLDVDHVLRFENGIDEVQESLLPCFQQFVMWPPDDCITLEWVQDMMIILEQASQKMLSSEFCHVVPTMFVEKLVDGVCSILCKEPNCVDINCQGEDSRVIVVGDIHGQFHDLMLLLKHAGVPSENQIYVFNGNYVDKGAWGVEVLLVLLAWKVLMPHRVYLLRGNHESRYCTTRYGFKEEVWSKYGDQGEDVYSKFLECFKELPLASVIANCAYTTHGGLFRSIDAASSQKPKRNKTHRVDLGSLAELSEVKRSCVDCPYEGPNILLSDVLWSKPSNKDGLRDNTGQKLGLWWGPDCTEAFLKQNNLKLIIRSHEGPDARAGRDDDFGDMFSGYSIDHDGESGKLYTLFSAPHYPQFGKTIYNNKWAYAVLKSPDFGSPSFHSFKAAERPMVMFSYQVDIQILNGLYSFLL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00283 536 Gene3D - 159 530 IPR029052 -
Cca10g00283 536 Pfam Calcineurin-like phosphoesterase 223 442 IPR004843 GO:0016787
Cca10g00283 536 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 522 - -
Cca10g00283 536 SMART pp2a_7 190 513 IPR006186 GO:0016787
Cca10g00283 536 SUPERFAMILY Metallo-dependent phosphatases 185 518 IPR029052 -
Cca10g00283 536 PRINTS Serine/threonine phosphatase family signature 469 485 IPR006186 GO:0016787
Cca10g00283 536 PRINTS Serine/threonine phosphatase family signature 253 280 IPR006186 GO:0016787
Cca10g00283 536 PRINTS Serine/threonine phosphatase family signature 323 349 IPR006186 GO:0016787
Cca10g00283 536 PRINTS Serine/threonine phosphatase family signature 286 310 IPR006186 GO:0016787
Cca10g00283 536 PRINTS Serine/threonine phosphatase family signature 223 250 IPR006186 GO:0016787
Cca10g00283 536 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 1 522 - -
Cca10g00283 536 ProSitePatterns Serine/threonine specific protein phosphatases signature. 287 292 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00283 Cca-Chr10 3073413 3077434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00283 154 437 Calmodulin-binding Proteins AT5G63870 49.488 4.78e-94 287