Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00274 ATGGTGGTTATGGTGGTCTCAACATCACCTATGGACAAGCTAGGAACCCTTCACCACTGCATTTCTTTGGCATTGGAATATTGGGACATTTTGATCTTCGATGACGAAGAGGAGTCCACATACCAAATAGAGGCATTTTTCCTCACCGATGATTCTATTGAACAACTTGTTATTCCTGAGATTGTAGACCATTTCCCACCATCAAAGCTAGAAGTGCTATTCACAAAACTAGAAACAAAGCTTAAACCACTACCAAAATTTGTATCTTACATTTCTGACAATCCTGGAATGAGGCTAATCTTTGTTATGACAAGGGGTGCCCACTTTGTTGAAATAGATACCGTGGCAGGGAACATGATTTGCAGTAGCACAACGAATCCCAACGAAAAATCAAATGCAATTTCAAAGTACATTATAGATTGTAGTACTTTTGATCTATCTGCTGAAAAACTGTCATTGAACTCACCTCAGCAGAGTTATTCTGGAGTGCAGGCCACCATGCTGGTTGGGGAGGCTGTTAATAATACACTCATTGTTGTTGCATTTTGTTCCAAGGGTAATGACCTTTCTGCTAATGAGCTTGATATCACCAAATGCTCATTTCAACTAGGCCAAATTGCTAGCATATTCTATGACATTTCCCATTTCTTTATTTTCTCATTTTATGGCCTTGCCTTGTGGTATGAATCTGTTTTGAAGGAGTTTGATAGCTTTCAATCAATTTTGAAATCATGTATGGCCTTGGCAGCACAAACACCAGCATATCTGGCTATTGCAGAGGAGCTATGTGTTGCAAAAGTATtctaa 807 0.3903 MVVMVVSTSPMDKLGTLHHCISLALEYWDILIFDDEEESTYQIEAFFLTDDSIEQLVIPEIVDHFPPSKLEVLFTKLETKLKPLPKFVSYISDNPGMRLIFVMTRGAHFVEIDTVAGNMICSSTTNPNEKSNAISKYIIDCSTFDLSAEKLSLNSPQQSYSGVQATMLVGEAVNNTLIVVAFCSKGNDLSANELDITKCSFQLGQIASIFYDISHFFIFSFYGLALWYESVLKEFDSFQSILKSCMALAAQTPAYLAIAEELCVAKVF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00274 268 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 162 265 IPR039421 -
Cca10g00274 268 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 162 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00274 Cca-Chr10 3006436 3007346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00274 164 232 Calmodulin-binding Proteins AT2G36910 38.356 2.01e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00274 K05658 K08518 gmx:100777534 103.219