Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00262 ATGAGATTGCAACTTATTTTCCTGCTAATTAAGCTACATTTTGTTATATGTACACCCCAGTTTCATGAATATGCTGCCACCAATCTGCACCGTTGGAGAATCAGAGGCCCTTCAAGCATTGCATTCCCACCATTAGAGTCATCTTCTGGAGTTCCTGCTAGTATTGGACTTCCACCTTCCAAGGCATCTTCTAGAGTTCCTGGAAATATTCCACTTTCACCTTCCAAATCATTCTTCAAAATTCCCATAATGAAATGGATGCACAATTATGTGGACTCTCCAATATCACACCATCATAAACATAAGCATAAGCATAAGCATCACTATTCCAAAAGCAAGTCCACCAACCAAGTTCCTGGGCCAATCTTTCCAGTCCATCCTCATACTCATCAAGGTCCTCCAGTCTTCAAATCAGAACATCCATTCTCTTCACCCATGAGCTGGGATTTTCATGCACCAGCACCAGCACCAGCACCCGCAATTCTATCACACCAGTTGAATGTGCCCTCTCCTTCACCTAGAATTTCACCTCTAGGTCCATCATTAAAGAAGACAAAGACTCCACCACCAGCATATGCTTTGGTTCTACCATCTCCACCACCTAACAAAGATTGCATGTCTTTGACTTGCTCTGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCTCTTCAAGTTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCGAGCTGGCAAAAGAAATTGCAGCCAGTGTTTCGCTGAACCGTAATCAAGTACGCATCGTGGAAGCTGATGCAATAAGCCACCACCAGCTCGAGAAAACCAATGTTCTCATAAACTTGGTACCCCAAGGAGTGAAATTTGATGAAACAACAGCATTTTTAATATATAAGAAATTCTGGCAAAGAGAGATTCTCAATGATGCTTCTGCCTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCGCCTCCTTCAAATGTTTATGGTATAGATGCTGAACCGGACCCTGGTCGTGGCAACAATGGAACAATGGTGAAACCTTTTGGAGTAGATGTCTCAAGGAAGAAAAAAGAAGAGAATGGTGGAAGGGTGGTTATTATGATCGTGCTAACATCCTTTACTGTCTTTGTTCTATTCATGGGAGTTGCCTGGCTTTGTCTCTTGAAATGCAGTTTCTGTAATCTTGAACCTGAACAAGTTCCAGATGTTCAAATTCCATCTTCTTCGAAACAATCAGGGACTGCCAGTACTAGGTCATTGACTTATGGGAGCATGCCGGGTTCTAGATCAATGTCCTTCAGTTCTGGAACAATAATGTACACAGGATCAGCTAAAATATTCACTTTGAATGAAATAGAGAAAGCAACAAATAACTTCAATTCTTCAAGAATATTAGGAGAAGGTGGCTTCGGTCTTGTTTATAAAGGTGGCCTACAAGATGGCAGGGATGTGGCAGTGAAGATTCTCAAAAGAGATGACCAGCATGGTGACCGTCAATTCTTTGCAGAAGCCGATATGCTTAGTCGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTGTATGCACAGAGAAACAGACTCGCTGCCTAGTCTATGAGCTTGTCCCTAATGGCAGTGTGGAATCTCACTTACATGGTGCTGACAAGGAAATTGAGCCACTTGATTGGGATTCCCGGATGAAGATTGCACTTGGTGCAGCTAGGGGTTTGGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGCAACATCTTATTGGAATATGATTTTACACCCAAAGTTTCAGATTTTGGATTAGCTAGAACAGCACTGAACGAGGGAAGAAAGCACATCCCAACTCATGTTATTGGAACATTTGGCTACCTTGCTCCTGAATATGCAATGACTGGCCATCTTCTTGTCAAAAGTGATGTCTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCAGTGGATTTGTCACAGCCAACAGGTCAAGAAAACCTTGTTGCATGGGCTCGTCCATTCCTTACAAGTAAGGGGGGTTTGCAGAAGATCATAGACCCAGTTATAAAGCCTAGTGTTTCTGATGATACCATGGTAAAAGTAGCAGCGATTGCATCCATGTGTGTGCAACCAGAAGCCCCTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTATGCAGTGAGTTTGAGGAAACAAGTTATGTGAGACCAAAAGGTTCTCTAGGAGATGGTCTTGTAACTAATGTAGAAGGGAAATTCTCCAGTGTTCTTGGTGAAAGAGTGGACTTTTCTGAGTGTAACAAACCCCTGCCTCAGCCTGGTTATCAACCTAGTCGAGAACCCAGGTAG 2412 0.4283 MRLQLIFLLIKLHFVICTPQFHEYAATNLHRWRIRGPSSIAFPPLESSSGVPASIGLPPSKASSRVPGNIPLSPSKSFFKIPIMKWMHNYVDSPISHHHKHKHKHKHHYSKSKSTNQVPGPIFPVHPHTHQGPPVFKSEHPFSSPMSWDFHAPAPAPAPAILSHQLNVPSPSPRISPLGPSLKKTKTPPPAYALVLPSPPPNKDCMSLTCSEPLTYTPPGSPCGCVWPLQVKLRISIAIYKFFPLVSELAKEIAASVSLNRNQVRIVEADAISHHQLEKTNVLINLVPQGVKFDETTAFLIYKKFWQREILNDASAFGAYEVLYVHYPGLPPSPPSNVYGIDAEPDPGRGNNGTMVKPFGVDVSRKKKEENGGRVVIMIVLTSFTVFVLFMGVAWLCLLKCSFCNLEPEQVPDVQIPSSSKQSGTASTRSLTYGSMPGSRSMSFSSGTIMYTGSAKIFTLNEIEKATNNFNSSRILGEGGFGLVYKGGLQDGRDVAVKILKRDDQHGDRQFFAEADMLSRLHHRNLVKLIGVCTEKQTRCLVYELVPNGSVESHLHGADKEIEPLDWDSRMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTALNEGRKHIPTHVIGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPTGQENLVAWARPFLTSKGGLQKIIDPVIKPSVSDDTMVKVAAIASMCVQPEAPQRPFMGEVVQALKLVCSEFEETSYVRPKGSLGDGLVTNVEGKFSSVLGERVDFSECNKPLPQPGYQPSREPR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00262 803 Pfam Protein tyrosine and serine/threonine kinase 473 743 IPR001245 GO:0004672|GO:0006468
Cca10g00262 803 PANTHER OS01G0750732 PROTEIN 7 763 - -
Cca10g00262 803 Gene3D Phosphorylase Kinase; domain 1 443 545 - -
Cca10g00262 803 ProSiteProfiles Protein kinase domain profile. 470 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00262 803 Gene3D Transferase(Phosphotransferase) domain 1 546 758 - -
Cca10g00262 803 SUPERFAMILY Protein kinase-like (PK-like) 449 743 IPR011009 -
Cca10g00262 803 PANTHER OS01G0750732 PROTEIN 7 763 - -
Cca10g00262 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Cca10g00262 803 MobiDBLite consensus disorder prediction 413 434 - -
Cca10g00262 803 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Cca10g00262 803 CDD STKc_IRAK 476 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00262 Cca-Chr10 2855136 2859842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00262 202 752 Receptor kinase-like Gene Family AT5G56890 63.016 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Cca10g00262 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00262 - - gmx:100798578 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00262 10 2855136 2859842 Cca11g00324 11 4209569 4214856 PCT