Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00232 ATGTTGACTCATTTGACTACGTTGCCGAAGCACGGTTCCTTTTCAAGTACTCAAAGTCACAACATGGCACTCTTCTATCTGTCATCCTACACAATGTCCATCACTTTCTTCATTGCTTTTCTCAGTGCTCTACTTATTCAAGCTCAGGATCAATTAGGATTCATCAGCATAGACTGCGGAACTCCACAAGATGAGAACTATACTGACCCATTTACAGGCATAAAATATATTTCAGATGCAAATCTTATAAATACTGGTGTGAGTAAGCCAATAGTAGAACTCGGATATATAAATTACCGACAAATGGAGACCGTGAGAAGCTTCCCGGAAGGAAAAAGAAACTGCTTCAAAATAAACATCACAAGAGGCTCCAAATATCTGATCCGGGTGATTTTTTTGTACGGAAATTATGATCACCGAAGCAAGCTACCACAATTTGATGTTTATATCGGGGCTAACCGGTGGTGTACAGTGACTATAGCAAATTCAACCAGTGGCAAAATGAATGAGATCATACATGTACCTTCTCAGGATTACGTACAAATCTGTCTGGTTAACACAGGCAATGGGACACCATTTATATCAGCTATAGAATTGAGGACTTTGAACAATAAAACATACGACACTCAATTTGGATCACTGGAAACTTACGGCCCCCGGTACGATTTAGCTTCAAACACAACCTACAGGTACAAGTACGATATTTATGATCGCTACTGGTATCCCCACGAATTCGACCAAAGTTGGACACCACTACAAAATGATTCGATTACTGATGGTTCTTTACGCCAGAATGATTACCATCCAGCAGCTATTGTCATGAGCACAGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGATGGGAGCAACTTAGTCCAGATGATAAATTCATTGTTTACTTGCACTTCACGGAGATTCAAGGGTTAGCAGCGAATGAGACAAGGGAATTCAACATCTTCCTGAATGGAAAGCTATTGCGTCAAAATTTTTCTCCACCGCATATGGGTGTCAAAACTATTTATACCGACTCACCCATCAGTGGGGAATCAGAAATTAAAATTTCACTTGAGATGACCGAAAATTCAACCTTGCCTCCTATCATCAGTGCCACTGAATTTTACAGAGTAAACAACTTCCAGCTTTCAGATACATTCCAAGGAGATGTTGATGCGATTACAAGCATCAAGTCAGTTTATGAAGTGACAAGAGATTGGCAAGGTGATCCATGCCTCCCGAATGACTACTTGTGGGATGGTCTGAATTGTTCTTATCGCGGAAATGGCTCCCCAAGAATCACAACTTTGAATTTATCTTCAAGTAGATTGTCAGGAAAGATAGACCCTTCAATTTCAAAGCTCACTATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAACGATGAACTTCCTGATTTTCTGTCTCAATTACAACACTTAAAGATATTAAACTTGGAGAACAATAACCTCTCTGGTTCAATTCCCTCTGCACTGGTTGAAAAATCTAAGACAGGTTCCCTTTCACTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCATTGCAATGAGAATCTATGTGAATCTGGTCATTGCAATGAGAAGAACATCGTTACGCCCTTAGTAGCGTCAATAAGTGGGATTTTGATTCTTCTAGTGGCCGTGGCAATAATGTGGACTCTTAAAAGGAGAAAATCAAAAGCTTTAATGGAAGAAAGGGATCAAAATAAAATGTCACGGCAATACACAGAACCAGACGATTCATTTCGACACCCCAAAAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAATTTCAATACAATTGTTGGAAAGGGAGGATTTGGAGTTGTTTATCTGGGCTACATCGATGACACTCCAGTGGCAGTGAAAATGCTTTCTCCTTCGGCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTACACTTCTAGTGAGAGTTCATCACAAAAATTTGACCTCCCTTGTTGGTTATTGTAATGAAGCAAACCACAAGGCTCTCATATACGAGTACATGGCTAACGGAAACTTACATGAACATCTCTCTGGTAATTACAGCAAATCAAAATTCTTGAGCTGGGAAGACAGACTTCGTATAGCATTGGATGCAGCCTCAGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATCCATAGAGATGTAAAATCTACAAACATACTGTTGAATGAACACTTCCAGGCAAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAACTGATGGGGGATCTCATGTGTCAACTGTTGTTGCTGGTACTCTAGGTTATCTGGACCCTCACTACTCCATATCCAGTAGATTAACAGAAAAAAGTGATGTTTATAGTTTTGGAGTAGTTCTTTTGGAAATAATCACAAATCAAGCAGTAATAGCAAGGAATCAAGAAAAGGGTCACATAAGCGAAAGGGTTAACTCTTGGATTGCGAAAGGGGATATCAAGGGCATAGTTGACTCAGGGTTAGAAGGAGATTTTGACATTAACTCAGCTTGGAAAGCGGTAGAAATAGCAATGGCTTGTGTGTCTCTGATTCCAAACGAAAGGCCAATGATGAGTGTGGTAGTGGTTGAACTAAAGGAGGCTTTAGCAACAGAATTAGCTCGAACAAAAAATAATAGTGGTGTTAATTCCAGGTATTCGGTTGAATCGGTCAACGTGAATCTGGACACCGAATTCATGCCCCTAGCTAGGTAA 2760 0.3964 MLTHLTTLPKHGSFSSTQSHNMALFYLSSYTMSITFFIAFLSALLIQAQDQLGFISIDCGTPQDENYTDPFTGIKYISDANLINTGVSKPIVELGYINYRQMETVRSFPEGKRNCFKINITRGSKYLIRVIFLYGNYDHRSKLPQFDVYIGANRWCTVTIANSTSGKMNEIIHVPSQDYVQICLVNTGNGTPFISAIELRTLNNKTYDTQFGSLETYGPRYDLASNTTYRYKYDIYDRYWYPHEFDQSWTPLQNDSITDGSLRQNDYHPAAIVMSTAVTPANVSAPLVIRWEQLSPDDKFIVYLHFTEIQGLAANETREFNIFLNGKLLRQNFSPPHMGVKTIYTDSPISGESEIKISLEMTENSTLPPIISATEFYRVNNFQLSDTFQGDVDAITSIKSVYEVTRDWQGDPCLPNDYLWDGLNCSYRGNGSPRITTLNLSSSRLSGKIDPSISKLTMLEKLDLSNNSLNDELPDFLSQLQHLKILNLENNNLSGSIPSALVEKSKTGSLSLSVGQNPYLCESGHCNENLCESGHCNEKNIVTPLVASISGILILLVAVAIMWTLKRRKSKALMEERDQNKMSRQYTEPDDSFRHPKKQIYSYSDVLKITNNFNTIVGKGGFGVVYLGYIDDTPVAVKMLSPSAVHGYQQFQAEVTLLVRVHHKNLTSLVGYCNEANHKALIYEYMANGNLHEHLSGNYSKSKFLSWEDRLRIALDAASGLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKIIPTDGGSHVSTVVAGTLGYLDPHYSISSRLTEKSDVYSFGVVLLEIITNQAVIARNQEKGHISERVNSWIAKGDIKGIVDSGLEGDFDINSAWKAVEIAMACVSLIPNERPMMSVVVVELKEALATELARTKNNSGVNSRYSVESVNVNLDTEFMPLAR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00232 919 Gene3D Phosphorylase Kinase; domain 1 598 685 - -
Cca10g00232 919 Gene3D Transferase(Phosphotransferase) domain 1 686 907 - -
Cca10g00232 919 Pfam Malectin-like domain 57 379 IPR024788 -
Cca10g00232 919 SUPERFAMILY Protein kinase-like (PK-like) 590 878 IPR011009 -
Cca10g00232 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Cca10g00232 919 ProSitePatterns Protein kinases ATP-binding region signature. 617 638 IPR017441 GO:0005524
Cca10g00232 919 Gene3D Ribonuclease Inhibitor 392 512 IPR032675 -
Cca10g00232 919 SUPERFAMILY L domain-like 387 506 - -
Cca10g00232 919 Pfam Leucine Rich Repeat 482 501 IPR001611 GO:0005515
Cca10g00232 919 ProSiteProfiles Protein kinase domain profile. 611 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00232 919 Pfam Protein tyrosine and serine/threonine kinase 614 877 IPR001245 GO:0004672|GO:0006468
Cca10g00232 919 PANTHER PUTATIVE-RELATED 41 919 - -
Cca10g00232 919 CDD STKc_IRAK 617 882 - -
Cca10g00232 919 PANTHER OS07G0107800 PROTEIN-RELATED 41 919 - -
Cca10g00232 919 SMART serkin_6 611 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00232 Cca-Chr10 2510520 2521687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00232 32 919 Receptor kinase-like Gene Family AT2G19210 47.561 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Cca10g00232 Malectin_like 1.7e-104 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00232 - - gmx:106794186 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00232 10 2510520 2521687 Cca10g00232 10 2510520 2521687 ECH