Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00207 ATGGCATCCCTTTTGGTCGTCCTATGTACTTGTGTGATCGTTTTCATGGCTGCCACGAATAGTGTTGAAGCTAGCGTGCAATTCAAAGTTGGTTGGCATGTACCTGCCCCCAACAATACTGAATTTTATATCAAATGGGCTGAAAAGAACAGATTTCAAATTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCGGTTCTTAGTGTGGAGAAATGGGATTACATTAACTGTGACGCAAGTAACCCCATCACTGCTTTTGACAATGGAAAGAGCACTTTCAATCTTGATAGGCCTGGAGACTTCTACTTCATCAGTGGAACCGATTATCACTGCAATAATGGGCAAAAACTTGTAGTGGATGTGATGCACCCTCATCCTATTCCCAAATCTCCACCACCCATTTCGCTTCCACCACAAAGCTTTCCACCAATGGCTCCTCCACCATCGGATGATAGCTCAGAGGTTCCATCATCAGCCTCCACGCTTCTTACTACAATTGTTATGTCTTCTTTGGTCACATTTGTTAGTGTCATGATGCTGTTAGCACCCTGA 555 0.436 MASLLVVLCTCVIVFMAATNSVEASVQFKVGWHVPAPNNTEFYIKWAEKNRFQIGDALVFEYQNDSVLSVEKWDYINCDASNPITAFDNGKSTFNLDRPGDFYFISGTDYHCNNGQKLVVDVMHPHPIPKSPPPISLPPQSFPPMAPPPSDDSSEVPSSASTLLTTIVMSSLVTFVSVMMLLAP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00207 184 SUPERFAMILY Cupredoxins 30 123 IPR008972 -
Cca10g00207 184 Pfam Plastocyanin-like domain 39 116 IPR003245 GO:0009055
Cca10g00207 184 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
Cca10g00207 184 CDD OsENODL1_like 27 123 IPR041846 -
Cca10g00207 184 MobiDBLite consensus disorder prediction 129 158 - -
Cca10g00207 184 MobiDBLite consensus disorder prediction 129 151 - -
Cca10g00207 184 Gene3D - 25 130 IPR008972 -
Cca10g00207 184 PANTHER EARLY NODULIN-LIKE PROTEIN 2 9 180 - -
Cca10g00207 184 PANTHER BLUE COPPER PROTEIN 9 180 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00207 Cca-Chr10 2180229 2180917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00207 3 143 Phytocyanin Superfamily AT1G79800 48.227 6.37e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00207 - - gmx:102664880 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00207 10 2180229 2180917 Cca10g00207 10 2180229 2180917 ECH