Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00177 ATGAACGGCGCAGGGAGGCAGGGGCTGAGATCTGGTGCGGCGGGGGTGCACCACCAGCGCCAGTACTCCGATAACTTCCTCGACGGCTCCTCCAACGGCAACCGCTGGCTCCAATCGGCTGGCCTCCAACACCTCCAATCCTCCGCCAATCCGCTTCAGGACTATAACTTGTACGGCGCTGCGCCGGGAGGAGGAAGAGTGTACCGGAATGCGCAGAGGAGCTTTAATGGAGGAAATGAGTATTATATGGAGCCTTCCACGCCTCCCGGTGGTTACCGCGCTTCGATGCAGAAAAAGAATGGCGAAGATGCCACTGGTGATTTCAGCCCCGGCTTGTTGGATCTGCATTCGTTCGACACCGAGCTTCTTCCTCCCGAGATGCCAGCCTCCAATGTATATGATGCCAACTTCATGTATCAACCTGGCCGAGGTAGAAGCTTTGATGACTCTGAAACCTACATGTTGAGCAAACAGACTGGCAGAGCTCGTGCTCCTGAAAACATTTTGAAAACTTTACCTGCAGACAAAGAGAAATCAAATTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCGATGAATAAAAAGGAATTAACAAAAAATGAGGAAGATATTATAGAAACTTATTCCAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTTGACCTAACTCAGTATGTAGAAAAGCATGAGTTCGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTATATCGTGAAACAGTTGAGCCCATAGTTCCAATAATCTTTGAACGCACCAAGGCAACTTGCTTTGCATATGGACAAACAGGAAGTGGAAAAACTTATACAATGAAGCCACTGCCACTTAAAGCGTCAAGGGACATCCTTAGATTGATGCATCATACTTACAGGAACCAGGGATATCAATTGTTTGTGAGCTTCTTTGAAATATACGGTGGCAAGCTGTTTGATCTCCTTAATGATCGGAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAATACCGAGTTTCGGATGTGGAGAACATCAAAGAACTGATTGAGAGAGGAAACTCCTCAAGAAGTACAGGCACAACAGGTGCAAACGAGGAATCATCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCCCGTTTGGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGAGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGACAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAATTGACTGAAGTTTTGAGGGATTCCTTTGTTGGCAATTCCCGCACTGTTATGATATCATGTATATCACCAAGCTCTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCCTATCGAAAGGGAACATTTCAAAGAAAGATGTTATGACGTCAAATGTCAACCTTAAAGAATCAAGTACAGTTCCCTTATCTTCCGTTACTGGGATAGCCTATGAGGATCGAATGACAGATGGATGGCCGGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGCATTACGAGCAGGTGAAACCATCTTTGAAGAAAAATGGAAAGGTGGATTCATATGCTACAACAGAGGACAAATTGAAGAAACCCAGTGGTCAGATCAAATGGAAGGAGCTCCCAAAAGTTGAGCCTCAAACCACACATGCTGAGGATGATTTAAATGCCCTCCTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTCGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATAACAAGATTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACCGGTTACTAG 2100 0.4438 MNGAGRQGLRSGAAGVHHQRQYSDNFLDGSSNGNRWLQSAGLQHLQSSANPLQDYNLYGAAPGGGRVYRNAQRSFNGGNEYYMEPSTPPGGYRASMQKKNGEDATGDFSPGLLDLHSFDTELLPPEMPASNVYDANFMYQPGRGRSFDDSETYMLSKQTGRARAPENILKTLPADKEKSNSVAKIKVVVRKRPMNKKELTKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGYQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIERGNSSRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNISKKDVMTSNVNLKESSTVPLSSVTGIAYEDRMTDGWPDENEGDDFSPPEEHYEQVKPSLKKNGKVDSYATTEDKLKKPSGQIKWKELPKVEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00177 699 CDD KISc_KIF2_like 184 505 - -
Cca10g00177 699 SMART kinesin_4 182 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 PANTHER KINESIN-RELATED PROTEIN 6 1 699 - -
Cca10g00177 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 507 IPR027417 -
Cca10g00177 699 MobiDBLite consensus disorder prediction 363 382 - -
Cca10g00177 699 ProSiteProfiles Kinesin motor domain profile. 184 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 MobiDBLite consensus disorder prediction 362 382 - -
Cca10g00177 699 MobiDBLite consensus disorder prediction 545 569 - -
Cca10g00177 699 PRINTS Kinesin heavy chain signature 264 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 PRINTS Kinesin heavy chain signature 373 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 PRINTS Kinesin heavy chain signature 407 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 Pfam Kinesin motor domain 190 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca10g00177 699 Gene3D Kinesin motor domain 162 510 IPR036961 -
Cca10g00177 699 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 699 - -
Cca10g00177 699 MobiDBLite consensus disorder prediction 79 106 - -
Cca10g00177 699 ProSitePatterns Kinesin motor domain signature. 406 417 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00177 Cca-Chr10 1909564 1915242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00177 184 507 Calmodulin-binding Proteins AT5G65930 33.832 1.70e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00177 K10393 - gmx:100799100 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00177 10 1909564 1915242 Cca10g00177 10 1909564 1915242 ECH