Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00175 ATGAGCAGAAATGTGTTCTCCCCTTTATTGTTGTTCCTCATCCTCCAACTCCTTAACCCCTCTGAAGCCGAAAAGATAGCAGTTTACTGGGGCCAAAGCACCAACGAGGGAAACCTTACTGAAACATGTGCAACAGGAATATACTCTTATGTCAACATAGCATTCCTCTCCACGTTTGGGAATGGCCAAACCCCTAAACTCAATCTGGCAGGTCATTGTAACACTTCCACAAATGGGTGCACTGAGATTGGGAGAGATATTAAGAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAGGATCAGTCACTTACTCTCTAACTTCGGTTGAGGATGCCAAAAATGTGTCAAATTACTTGTGGGACAATTTCCTTGGTGGATCCTCCTCATCACGCCCATTCGGTGATGCAGTATTAGATGGCATTGACTTTGACATAGCAGGAGCTGGATCATCATACATGGGGAACCTTACAAGTTACCTCAAATCACATTCATCCACACGCAAAGTATACTTGTCAGCAGCTCCTCAGTGTCCATTTCCTGATGCTAACCTGGGTGAGGCCCTTGATACAGGCTTTTTTGACTATGTCTGGGTACAATTCTATAACAATCCTCCATGCGATTGTACCCAAGAAAATTTCAATAAGTTCTTAGAAGCATGGAACAAATGGGCCTCATCATTGAAAGGAGGGAAACTATTTTTGGGGTTACCAGCGGATCAAGCTGATGCTGGAAGTGGTTATGTTGCAGCTGATGTATTGATGTCTCAGATTTTACCTGCAATAAACAATTCATCAAAATATGGAGGTGTCATGTTGTGGTCAAGCCACCCTGATATAATGAATGTATACGGTACTTACATTCAAAATTTTCAATTAAATGAGACAACAAATCCTCTGTGCACACAGCAAAGCCTTCCTTCATGCAGGAGTCGGGATGGCAATTTTGTTGAACGTGTTGGTGACATGTCCACTGTTGGCATCAAAGTTTATGAAGACAACAATGGAACAAACTGCTGTGAGATTGCATGTAAGAACAACTGTTCCTGTGAAGCATATGCCCCAATAAATCACATTGACAGTACCGGATGCCAGATATGGGTCAAAGGAACCAAATTTTTCAAAGCTTCAGGGGATTTAGCACTGCCAATCTACGTTTCTGTTACACTGCTTCCAGAAGAACACAAAGGAAAGGGGTGGTGGATATGGCTCATCCTTGGGGTGGGAGCTGCCCTTGCAATGCCTGTGATCTTTTATTTATGTCGGGCCTTGTTGAGAAAATACAAAGCAAAAGTGGAGAGAAAGAAGATGCAGGAGAAGATATTGCATGACATTGGAGGTAATGCTATGCTTTCAATGGTGTTCGGCAAAACCATAAAAAGTAAGAACAAGGGAAAGACAAGCAATGAGGTTGAAATATTCACTTTTGAAACCATCGATGCTGCCACAAACAATTTTTCAGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCAGTTTATAAGGGAACTTTGAGTGATCAGCAAGAAGTAGCAATAAAGAGACTATCAAAAAATTCTGGACAAGGGCTAATAGAGTTCACAAATGAAGCCAAACTCATGGCCAAACTTCAGCACATTAATCTTGTAAAGCTTTTAGGGTTCTGCATCCAGAGAGAAGAAAGAATATTGGTCTATGAGTACATGTCTAACAATAGTTTAGACTTCTACTTGTTTGATTCTGCAAGAAAGAATTTGCTCGACTGCAGAAAACGGCTGAACATCATTGGAGGCATTGCTCAAGGACTTCTGTATCTTCACAAGTATTCAAGACTAAAGGTGATACATCGAGACTTGAAAGCAAGTAATATATTGCTTGATCATGAGATGAATCCTAAAATATCTGACTTTGGCATGGCTCGAATCTTTGGTGTAAGAGCATCAGAAGAAAATACAAATAGAGTTGTTGGTACATATGGATACATGGCTCCAGAATATGCAATAAATGGTGTTGTGTCAATCAAAACAGATGTGTTCAGCTTTGGTGTACTGCTACTTGAGATACTTAGTGGCAAGAAGAATAACAGTCGCTATCATTCGGATCACCCACTCAACCTTATAGGATACGCGTGGCAGCTTTGGAATGAAGGCAGAGTTCTGGAGCTGATAGACCCAACATTAAATGAATTATGGTCTCGCAATGAAGTTTTGAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCGACAGATAGACCAAACATGGTAGATATTATTTCATTTCTATCAAATGATACAATCCAAATTCCTCAACCAAAGAAGCCAGCATTCTTCATCAATCAGATTGTGGAAGAGTCAGAGCCTCCTTACAGTAGGCAAGAATTTAATTCCTTAAATGATGTAACACTGTCTAGTACGCATGGAAGATAA 2424 0.4068 MSRNVFSPLLLFLILQLLNPSEAEKIAVYWGQSTNEGNLTETCATGIYSYVNIAFLSTFGNGQTPKLNLAGHCNTSTNGCTEIGRDIKNCQKQGIKVMLSIGGGSVTYSLTSVEDAKNVSNYLWDNFLGGSSSSRPFGDAVLDGIDFDIAGAGSSYMGNLTSYLKSHSSTRKVYLSAAPQCPFPDANLGEALDTGFFDYVWVQFYNNPPCDCTQENFNKFLEAWNKWASSLKGGKLFLGLPADQADAGSGYVAADVLMSQILPAINNSSKYGGVMLWSSHPDIMNVYGTYIQNFQLNETTNPLCTQQSLPSCRSRDGNFVERVGDMSTVGIKVYEDNNGTNCCEIACKNNCSCEAYAPINHIDSTGCQIWVKGTKFFKASGDLALPIYVSVTLLPEEHKGKGWWIWLILGVGAALAMPVIFYLCRALLRKYKAKVERKKMQEKILHDIGGNAMLSMVFGKTIKSKNKGKTSNEVEIFTFETIDAATNNFSVANKLGEGGFGPVYKGTLSDQQEVAIKRLSKNSGQGLIEFTNEAKLMAKLQHINLVKLLGFCIQREERILVYEYMSNNSLDFYLFDSARKNLLDCRKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKASNILLDHEMNPKISDFGMARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKTDVFSFGVLLLEILSGKKNNSRYHSDHPLNLIGYAWQLWNEGRVLELIDPTLNELWSRNEVLRCIHIGLLCVQDQATDRPNMVDIISFLSNDTIQIPQPKKPAFFINQIVEESEPPYSRQEFNSLNDVTLSSTHGR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00175 807 Gene3D Phosphorylase Kinase; domain 1 462 564 - -
Cca10g00175 807 ProSiteProfiles Protein kinase domain profile. 489 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00175 807 CDD STKc_IRAK 495 760 - -
Cca10g00175 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Cca10g00175 807 Pfam Protein tyrosine and serine/threonine kinase 491 759 IPR001245 GO:0004672|GO:0006468
Cca10g00175 807 PANTHER OS01G0783800 PROTEIN 210 776 - -
Cca10g00175 807 CDD GH18_hevamine_XipI_class_III 25 293 IPR045321 -
Cca10g00175 807 Gene3D Glycosidases 24 287 - -
Cca10g00175 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 210 776 - -
Cca10g00175 807 Pfam Glycosyl hydrolases family 18 26 257 IPR001223 GO:0005975
Cca10g00175 807 Pfam Domain of unknown function (DUF3403) 762 807 IPR021820 GO:0004674
Cca10g00175 807 Gene3D Transferase(Phosphotransferase) domain 1 565 771 - -
Cca10g00175 807 SUPERFAMILY Protein kinase-like (PK-like) 472 788 IPR011009 -
Cca10g00175 807 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 294 IPR001223 GO:0005975
Cca10g00175 807 SMART serkin_6 489 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca10g00175 807 SUPERFAMILY (Trans)glycosidases 21 290 IPR017853 -
Cca10g00175 807 Pfam PAN-like domain 335 372 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00175 Cca-Chr10 1896702 1900483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00175 453 791 Receptor kinase-like Gene Family AT4G23190 55.587 2.19e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca10g00175 PK_Tyr_Ser-Thr 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00175 - - ccaj:109788485 1461.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00175 10 1896702 1900483 Cca10g00175 10 1896702 1900483 ECH