Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00153 ATGGGTGTTAACTCCAACAGAGTGGAACACTTCGACAGCCATGAAACCACCATCAAAATCCAAACCATGCCATCATTTCAAATCCATGCAGTGCAGTTGCCACCCCAACAAACCACTCTCCATAAACTCAGACACAGACTCTCCGAAATCTTCTTCCCCGATGACCCTCTCCACCGTTTCCAAAACCAAACTTGCTTCAAAAAGTTCCTCCTCGCACTTCAGTACCTCTTCCCCATTTTCCACTGGGCCCCTCATTACAACTTTACCCTTCTCCGTACTGATCTCATTTCCGGCCTCACCATTGCCAGTCTCGCCATTCCTCAGGGGATCAGTTACGCCAAACTTGCAAACTTGCCACCAATTGTGGGACTATATTCAAGTTTCGTGCCTCCATTGGTTTACTCACTTCTCGGAAGTTCTAAACATCTCGGTGTTGGACCGGTTTCCATTGCGTCTTTGGTAATGGGATCAATGTTGAACGAGAAAATTTCTTACACTCAAGACCCAACTCTTTATCTAGGAATGGCTTTCACCGCAACTTTCTTTGCTGGTGTGTTCCAAGCTTCTTTGGGTATACTAAGGTTAGGATTCGTGATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACGGGTGGAGCTGCCATTATTGTTTCACTGCAGCAGCTTAAAGGCTTACTTGGAATCGTGCACTTTTCTAACAAGATGCAAATAATCCCTGTTTTGATCTCTGTTTTCGACCAAAGACACGAGCCAGATCCAAGTGAGATGACCAAAATAGCTGCAGAGGGGATTCTAACTTGTTTGCAAGATGCAATATGTTCTCTAGAGGAAAAACGGGACATCCGCAAAGGAACTGAGGACTGGAAGTTCTTACCTCGTGTTGTTGAGGAGCTTGCAAAGTTGGATGTGGTAAGAAATAACAAGAACACATTGTCAAAGGAAGATCTTCACAGACAAGCTTTGGATTGTAAAAGTATTTATGAAGAGGAGCTAAATAGTTTCGATCATGAAAGGAAAGAGAATTCAAAGGTAAATAAAGAACAGAGGAGCAAAACTGGAAGAACAAATGGCATGTCTTCTGGTGCAGTTGAGTATGATAGTGATGAGACAATTGAGATGACAGAACAAGAAATTGACCTTGCATATAAGACTTTGTCCTCTAACATCTGCCACTTGTGA 1182 0.4332 MGVNSNRVEHFDSHETTIKIQTMPSFQIHAVQLPPQQTTLHKLRHRLSEIFFPDDPLHRFQNQTCFKKFLLALQYLFPIFHWAPHYNFTLLRTDLISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYSLLGSSKHLGVGPVSIASLVMGSMLNEKISYTQDPTLYLGMAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFSNKMQIIPVLISVFDQRHEPDPSEMTKIAAEGILTCLQDAICSLEEKRDIRKGTEDWKFLPRVVEELAKLDVVRNNKNTLSKEDLHRQALDCKSIYEEELNSFDHERKENSKVNKEQRSKTGRTNGMSSGAVEYDSDETIEMTEQEIDLAYKTLSSNICHL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00153 393 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Cca10g00153 393 MobiDBLite consensus disorder prediction 335 363 - -
Cca10g00153 393 Pfam Sulfate permease family 91 251 IPR011547 GO:0016021
Cca10g00153 393 MobiDBLite consensus disorder prediction 335 351 - -
Cca10g00153 393 PANTHER SLC26A/SULP TRANSPORTER-RELATED 15 251 - -
Cca10g00153 393 PANTHER SULFATE TRANSPORTER 15 251 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00153 Cca-Chr10 1674529 1677478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00153 1 251 Inorganic Solute Cotransporters AT3G15990 68.924 1.26e-118 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00153 K17471 - ccaj:109815232 499.975