Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00152 ATGGGTGTTAACTCCAACAGAGTGGAACACTTCGACAGCCATGAAACCACCATCAAAATCCAAACCATGCCATCATTTCAAATCCATGCAGTGCAGTTGCCACCCCAACAAACCACTCTCCATAAACTCAGACACAGACTCTCCGAAATCTTCTTCCCCGATGACCCTCTCCACCGTTTCCAAAACCAAACTTGCTTCAAAAAGTTCCTCCTCGCACTTCAGTACCTCTTCCCCATTTTCCACTGGGCCCCTCATTACAACTTTACCCTTCTCCGTACTGATCTCATTTCCGGCCTCACCATTGCCAGTCTCGCCATTCCTCAGGGGATCAGTTACGCCAAACTTGCAAACTTGCCACCAATTGTGGGACTATATTCAAGTTTCGTGCCTCCATTGGTTTACTCACTTCTCGGAAGTTCTAAACATCTCGGTGTTGGACCGGTTTCCATTGCGTCTTTGGTAATGGGATCAATGTTGAACGAGAAAATTTCTTACACTCAAGACCCAACTCTTTATCTAGGAATGGCTTTCACCGCAACTTTCTTTGCTGGTGTGTTCCAAGCTTCTTTGGGTATACTAAGGTTAGGATTCGTGATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACGGGTGGAGCTGCCATTATTGTTTCACTGCAGCAGCTTAAAGGCTTACTTGGAATCGTGCACTTTTCTAACAAGATGCAAATAATCCCTGTTTTGATCTCTGTTTTCGACCAAAGACACGAGGTACAGAGCACCACCAAATCTATTCGCAATTTACTTTAA 792 0.4508 MGVNSNRVEHFDSHETTIKIQTMPSFQIHAVQLPPQQTTLHKLRHRLSEIFFPDDPLHRFQNQTCFKKFLLALQYLFPIFHWAPHYNFTLLRTDLISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYSLLGSSKHLGVGPVSIASLVMGSMLNEKISYTQDPTLYLGMAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFSNKMQIIPVLISVFDQRHEVQSTTKSIRNLL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00152 263 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Cca10g00152 263 Pfam Sulfate permease family 91 254 IPR011547 GO:0016021
Cca10g00152 263 PANTHER SLC26A/SULP TRANSPORTER-RELATED 15 252 - -
Cca10g00152 263 PANTHER SULFATE TRANSPORTER 15 252 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00152 Cca-Chr10 1672036 1673235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00152 1 251 Inorganic Solute Cotransporters AT3G15990 68.924 1.64e-120 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00152 K17471 - ccaj:109815232 521.161