Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00129 ATGGCGAGGGGAGGGCAGTGCTTGGACAAGGTTCGGAGGTTCGTTAGGACGGTTTTCTTCGTGGCGGCATTGGTGGCGTCGCTGCTCGTGACGTCGCTGCCGGTGCTCGTGGCGGTGGTCGACGTGCTCGTCCCTTGCGTACTCGTCTCCAGCTTCACGTGCGTCAAGTGCTACGGCTTCAAGGAGCATTTGCGTCGTTACGCTTTCAAGAGCTCCTTGACGGACATTCCTCTCGTTTCGGTCATAAGATCCTTCATCATTATCTGTGTTTATTCGATTTGTGATGGCCCAGCTCTTTCACATGGTCCTTACCTTGGAACTGTGACTCTGTCCTCCTTTATCTCAATTGTTCTTCTTTCAGTCAAAGCCTGTGTTTTCACCGTAAATTCCCAGATTGAAGCAGAAGCTACGGTTTCCCCTACAAGGCAGAGACTCCATTTGAAGAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCTCTTGGCCATATGGTGGTTGCTTACAGAACCAGCTGCAGAGCAAGGAGGAAGCTAATGTTTCATCGAGCGGACCACGAAGCGGTACTTTCATGCAAAAATGTTTTCTCTGGCTATCAGAAGGTCCCTCGGTCTCCTGTTCCCTCTGAGGGGAGAACACCAAAGAGCGACAGTGAAATGAAACGGAGGCCTTTTGGAACAGCTCGTGATGAAGAACTGCCGATCAGATTACTTGCAGACTCGGAGAGCTTATTCATCACCTGCCAAGGTCTTATTCTCCATTACAAGCTCAGCCTGCCTGGTTCACCTCCACTTCACATGTCCTCAACATTTTGCCGCACTTCATCAATGTCTGGGGGTTTATCAAAGTTTAATAGGAACTTGACGTGTGTATCTCCAAAAATGCATCGGCAACTCTACAGGAGCTATAGCAATCAATTCCATGGCTCATCTTTATATGCTCCTCTTTTAGATGGTCCATTAACCTCTCCCCATCTCACTGAACATATCCCTGTTTTGCATCTAGATGAAATTGTTGAAGATGAGGAAACATTTAAATTAGAGTCTTTGTCTTTGGAGCAAAATTTAGAGGACACTGGCCAAGTAGGTATTGTTTTAATACATGGGTTTGGTGGAGGTGTCTTTTCTTGGCGACATGTAATGGGACCTCTAGCTCGGCAGAGTAATTGCACAGTTGCTGCATTCGATAGGCCTGGCTGGGGATTGACTTCAAGACTGAGTCGGGAGGATTGGGAGAAAAATGATCTGCCTAATCCTTACAAACTTGAAAGTCAGGTAGATCTGCTTTTGTCTTTCTGTTCTGAGATTGGATTTTCTTCCGTTGTGCTTATTGGTCATGATGATGGAGGGCTGCTTGCTCTGATGGCTGCACAGAGAGTTCAAACATCAATGAATTCTTTCAATGTTACAGTGAAAGGGGTTGTATTATTGAATGTTAGCTTGTCAAGGGAAGTAGTTCCTTCCTTTGCTAGAATCCTTCTTCATACTTCACTAGGAAAGAAGCATTTGGTTCGTCCACTACTAAGAACGGAGATAACCCATGTGGTGAACCGGCGATCATGGTATGATGCTACAAATTTGACAACAGAAGTTTTGACACTCTATAAGGCTCCACTATATGTAGAAGGATGGGATGAAGCACTTCACGAGATTGGTAAACTGTCATCTGAAACCATCCTTACATCGAAGGATGCAGACTCATTGCTACAAGCTGTAAAAGACATACCAGTGTTGGTCATAGCTGGTGCCGAAGATTCACTCGTCTCAATGAAATATTGTCAAGCAATGGCTTCCAAATTTGTAAATTCTAGACTGGTTGCTATATCCGGATGTGGCCATCTACCCCATGAGGAGTGTCCAAAGGCGTTGCTTGCGGCTATATCACCTTTCATTAATAAACACTTCTCTCTTCTTTCCTCACTCAGCCGCAGCATCATGTCACCGCCATTAGAGGCGAACGTTGGAGAATCCCTGGGTTTTAAGTGGGGCACTAAGATGGGTGTTGATGTGAAAAACAAAGACATACAGTACTACGAGTCATTTGTGTTGGAGGGTGTCGAGTATTTTCTCTATGATTGTGTCTACATGCAGACTACAGGGTTCCTTGAAACTTCCATCGCCAAGCTTCTTAAGATATATGAGAGGCCAACTCGGGAAAAGGTGGTCAGAGTTGTGTGGTATTTTCGTCCCGTTGAAATTCGGAATTACTTGGCACAGTATCAGCCACGTTGGGATGAGTTGTTTTTGGCTTCCGGCGAGGGCCACAAAGGTGCTGCCAATGACGTTGCTCTGGAATCAATTCTTGGAAAATGCAAAATTGTTTGCACTTCCAAGGACGAGAGAAATCCTAAGCCATTGGATACGGACTTAAAGAAGGCAGACTACTTTTTCAAATGTACTTTTGATGTTGCAAGTCGTGTAATCATGGATAAATTTCCTAAAGAGATTGATGGAGTTAAAGTGGAGCAGTTCTTCAACAAGAATGGGGATGAAAAAACAAGTAGCCATCTGCATGTTGGGACAAATATGAGACCCAAAGTTGTAATTAAGACTAGGACTGATCCTTGTATTATCTCACATTGTCAAGTTAGTGATAAAGCTGAAATGAGAACTTCTGTGAATGTTTTGCCAAAGCAATCACCAGATTATTTTCCAAATAAAAAGAGGAAGATTGTAGAAGAGAAGCCAACCATTGGTCGAAGTAGCCAAGTCCTTAATGAAGAGGAAATTGATGAGAAGAAGGTAGAGCTTAGACAGGATGAAAGAGTCAAAACATACAATAAAGTCATTGAAGTAATGAAAAGGCCAGATGCAGAAAAAAGAAAGTGGTTTAAGAAAATGCCTTGGGATGATAGACTGCAGAGAGCTCAAGAGTTGAATACCCTAGTTTTATTGAATAATCTGGATCCATCCTATACGTCATCTGAAGTAGAGGATCTTGTTTGGTGTGCTCTCAAAGCAAAGGTTGAGGCAAGGATGATAGAATGGAGACCAACTTCCAATACTTACTATGGTAGAGCATTGGTTATTTTTAAAACAAAAGACGCAGCTGAAACTGCAATATCCGAGTTGAACAAGAGATGCCTTACTCTTGGGGAAGGGAGGATTGTCAGTGCCATGAAGGGAACTCTAAGTGAGCCTGCCAAGAAAAGAAATTTTACTGGCCATTTGGTCATTGACAGAGCTGCGCGTCATAAGCAAAGCCAGGAGATGAGAAATGCAGTATCAACATCGCATTGTTCCCAGCCCAATACAATTGAGTTCGAGATGGCCATTGAATGGAAACTGCAATATGAGAAGTTCAATGCATGCTGGAATGCACTACATCAGAGACAAAGGAAGGAGATACAGCGTGTGAAGACAATCCAACATGATTTTGAGGGGGGGCATGTTGAGGTTTTGTTTCCCCAGCCGCCATCTTGTCCTTTCACCACCTTCCTAAGCCACTGTGCGTCTATGCCCACATTTGTCACAGTTGTGAACAAGAAAATTGTAACAGTGGGGACCATTGATGATTCTCTTCTCTTTCACCGGTCTTTGAACGACGTGCACTTTGGCCACTCTTCTCTGCAAAAGAAGCCGAAGCCAAAGCCATTTCTAATACTCACATCTTTGAGTGTGGAAGCAGAAATGGAAGGATTAAAAGCACCTTTCAAGGGAACAGGGATATTGGCTCCAACTACTTATATATTCTTTGCTTCTGCACTACCTGTTATTGCCTTTGGCGAGCAGCTGAGTAGAGACACAGATGGAAGCTTGAGCACGGTTGAAACACTGGCTTCTACAGCTATTTGTGGAATCATACACTCAATTTTGGGTGGCCAGCCTCTCCTAATAGTAGGAGTTGCTGAACCCACTATTATTATGTACACCTACTTGTACAACTTTGCAAAAGATAGGGATTCCTTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTGTATGGACTTCTCTCTTGCTGTTTCTACTAGCAATATTCAATGCAGCAAATATCATCAATAGATTTACAAGGATTGCTGGTGAGGTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAACAGGCAATCAAGGGAATGGTAAGTGAGTTTAATGTTCCTAAAGAAGGAGACCCAACATCAGAAAAGTACCAATTTCACTGGCTGTATGCAAATGGATTGTTGGGTATTATATTCACCTTTGGCCTTCTCTATACTTCTTTAAAAAGCAGAAGAGCAAGGTCATGGCTATATGCAACAGGGTGGTTCAGAAGTTTCGTTGCAGACTATGGTGTCCCTTTCATGGTGGTGGTGTGGACAGGTCTATCATTCATAGTACCAAGTAAAGTGCCTTCTGGAGTTCCAAGAAGACTCACTTCTCCTCTTGCTTGGGAGTCTACTTCTTTACATCACTGGACAGTGATCAAAGATATGGGGGACGTTTCTCCAGCATATATTTTTGCTGCTTTCATTCCTGCCTTAATGATAGCAGGGCTTTACTTCTTTGACCATAGTGTTGCTTCTCAACTGGCACAACAGAAGGAATTCAATCTCAGGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTAACGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTACCTCAATCTCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGTTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATACGGCAGGAAGCTAGCAAATCTGAAATCTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTCAGTTGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCCTAAATGGTGAAGACAAAGGACTCAACAATAAGAGTACCTTTGATCCTGAGAAACACATTGATGAATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTTTTACAATCACTCCTTGTAGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCAGCTTCAGTTCTGTGGGGATATTTTGCATACATGGCCATTGATAGTCTTCCAGGAAACCAATTCTGGGAAAGGATACTACTTCTTTTTGTAACACCAAGTAGGTGGTACAAATTGTTGGAAGGGGATCATGCTTCCTTTGTTGAGTCAGTACCTTACAGATACCTAGTCTGCTTCACACTCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTGCTCATCACATTGAGACAGCATATACTCCCCAAGCTGTTCAAGCCTCATCATCTTAGGGAACTAGACGCTGCTGAATATGAAGAAATAGTTGCTGCTCCAGGACTAAGTTTCAACAAATCTTTCAGGGAGGTGGAATCACCCCGAAGATCAAAGGAAATGAATAATGCTGAAATACTAGATGAGTTAACTACTAACAGAGGGGAGTTGAAGGTCAGAACTGTGAGCTTTAGTGAGGAAAGAAATCGCCAGGTGTACCCTGATGAAAATGGATCCCCACCCTCAGATTGTTAG 5577 0.4316 MARGGQCLDKVRRFVRTVFFVAALVASLLVTSLPVLVAVVDVLVPCVLVSSFTCVKCYGFKEHLRRYAFKSSLTDIPLVSVIRSFIIICVYSICDGPALSHGPYLGTVTLSSFISIVLLSVKACVFTVNSQIEAEATVSPTRQRLHLKKSWGMPVLFLSSVVFALGHMVVAYRTSCRARRKLMFHRADHEAVLSCKNVFSGYQKVPRSPVPSEGRTPKSDSEMKRRPFGTARDEELPIRLLADSESLFITCQGLILHYKLSLPGSPPLHMSSTFCRTSSMSGGLSKFNRNLTCVSPKMHRQLYRSYSNQFHGSSLYAPLLDGPLTSPHLTEHIPVLHLDEIVEDEETFKLESLSLEQNLEDTGQVGIVLIHGFGGGVFSWRHVMGPLARQSNCTVAAFDRPGWGLTSRLSREDWEKNDLPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMNSFNVTVKGVVLLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITHVVNRRSWYDATNLTTEVLTLYKAPLYVEGWDEALHEIGKLSSETILTSKDADSLLQAVKDIPVLVIAGAEDSLVSMKYCQAMASKFVNSRLVAISGCGHLPHEECPKALLAAISPFINKHFSLLSSLSRSIMSPPLEANVGESLGFKWGTKMGVDVKNKDIQYYESFVLEGVEYFLYDCVYMQTTGFLETSIAKLLKIYERPTREKVVRVVWYFRPVEIRNYLAQYQPRWDELFLASGEGHKGAANDVALESILGKCKIVCTSKDERNPKPLDTDLKKADYFFKCTFDVASRVIMDKFPKEIDGVKVEQFFNKNGDEKTSSHLHVGTNMRPKVVIKTRTDPCIISHCQVSDKAEMRTSVNVLPKQSPDYFPNKKRKIVEEKPTIGRSSQVLNEEEIDEKKVELRQDERVKTYNKVIEVMKRPDAEKRKWFKKMPWDDRLQRAQELNTLVLLNNLDPSYTSSEVEDLVWCALKAKVEARMIEWRPTSNTYYGRALVIFKTKDAAETAISELNKRCLTLGEGRIVSAMKGTLSEPAKKRNFTGHLVIDRAARHKQSQEMRNAVSTSHCSQPNTIEFEMAIEWKLQYEKFNACWNALHQRQRKEIQRVKTIQHDFEGGHVEVLFPQPPSCPFTTFLSHCASMPTFVTVVNKKIVTVGTIDDSLLFHRSLNDVHFGHSSLQKKPKPKPFLILTSLSVEAEMEGLKAPFKGTGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDRDSLGRELFLAWAGWVCVWTSLLLFLLAIFNAANIINRFTRIAGEVFGMLITVLFIQQAIKGMVSEFNVPKEGDPTSEKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYATGWFRSFVADYGVPFMVVVWTGLSFIVPSKVPSGVPRRLTSPLAWESTSLHHWTVIKDMGDVSPAYIFAAFIPALMIAGLYFFDHSVASQLAQQKEFNLRKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRQEASKSEIYGKMQAVFIEMDNCPDNHSVVKELEDLKEVVLNGEDKGLNNKSTFDPEKHIDEYLPVRVKEQRVSNLLQSLLVGASVFAMPAIKKIPASVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLLEGDHASFVESVPYRYLVCFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPHHLRELDAAEYEEIVAAPGLSFNKSFREVESPRRSKEMNNAEILDELTTNRGELKVRTVSFSEERNRQVYPDENGSPPSDC 1858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00129 1858 MobiDBLite consensus disorder prediction 206 229 - -
Cca10g00129 1858 PANTHER ANION EXCHANGE PROTEIN 1222 1851 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cca10g00129 1858 Gene3D - 660 812 IPR043151 -
Cca10g00129 1858 Pfam Alpha/beta hydrolase family 367 628 IPR000073 -
Cca10g00129 1858 PANTHER BORON TRANSPORTER 4-RELATED 1222 1851 - -
Cca10g00129 1858 Pfam HCO3- transporter family 1644 1734 IPR011531 GO:0006820|GO:0016021
Cca10g00129 1858 Pfam HCO3- transporter family 1226 1370 IPR011531 GO:0006820|GO:0016021
Cca10g00129 1858 Pfam HCO3- transporter family 1388 1564 IPR011531 GO:0006820|GO:0016021
Cca10g00129 1858 SUPERFAMILY RNA-binding domain, RBD 953 1040 IPR035979 GO:0003676
Cca10g00129 1858 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 964 1047 IPR000504 GO:0003723
Cca10g00129 1858 ProSiteProfiles BAH domain profile. 689 815 IPR001025 GO:0003682
Cca10g00129 1858 SUPERFAMILY alpha/beta-Hydrolases 365 636 IPR029058 -
Cca10g00129 1858 Gene3D alpha/beta hydrolase 354 638 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00129 Cca-Chr10 1264744 1291354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00129 1223 1850 Antiporters AT1G74810 71.248 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00129 K24194 - gmx:100811184 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00180 11 2181845 2183845 Cca10g00129 10 1264744 1291354 ECH
Cca10g00129 10 1264744 1291354 Cca10g00129 10 1264744 1291354 ECH