Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca10g00095 | ATGGTTTCTCTTCCATTCTTTTCTCGTCAGAAGCTTCGACTTTCGCACTACCAAAAACAACTTGGGGTTAGATTTTATCCAATCATTAAAATTGAAGCCAATGTCTCAACCATATCTTCACATGGAGAAAATGCAGAGAACTCATATGGACTCATAATTCCAGTAACCTGCCTAAGAACCTTCCTTCTAATATTTCTCTTACTCCTTCTGCACTCTAACATCGCTTCTGCTACTCAATGGAAAATAAGATATGAAATCATGGGCTCATTCAGAAGTGGGATCTTGTTTTTCTTTGTGTTACTTTTGTTTAGAACATGTCTGGCCAATGATCAACACATTCGTCAGATATATCCTGGCTTCAGTGCTTCTAGACCAGATTGGAGAGACCACAATGGTCTTTTCTTACTATCCAACAGCTCAGTTTTCGCTTTGGGGTTCTTAACTGCTCTTGATGTCTCATTGTTTGTTTTGGTTGTGATTCACTTAAGCAGCAACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGAGATTCTGATAAATTTGTGTTTGACCATAGTGGTAATGCATATTTGGAAGGTGGGAATGGTGTAGTTTGGGCAACGAATACAACAGGACAAAAAGTAAAAGCCATGGAGTTGCTTGACTCAGGGAATTTGGTGTTGCTTGGGGAAAATGGAACAACTATTTGGCAAAGTTTTAGCCACCCCACTGATACTCTTTTGCCAGGGCAAGCCTTTGTGGAAGGAATGAGTCTCAAAAGCTTCCACAACAGCATGAACTTGTGTCATTATCTTAGTTATATGAAAGGTGATTTGGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTGTCAGAAGAAGTCTATAGAAATAGAAGCTCAAAAAATAACACTGCTAAGGTTCACTCGTTGTCTTTGGTGAACAATTCTTGGTGCTTTTATGACATGAATGGGGGTTTGTTGTGGAAAACTGTGTTCTCTGAACACTCAGATTCCAAGTCTTTGTGGTCTGCTACCTTGGATCCAAATGGTGCAATCTCCTTTTATGATCTCAACAAAGGGAGGTCTCATAACCCTGAAGCAGTTAAGGTGCCACAAGACCCTTGTGGCATTCCGGAGCCTTGTGATCCTTACTATGTTTGCTTCTTTGAAAACTGGTGTGTGTGCCCTGGACCTCTCAAACCTTTTAATTGCAAACCTCCCAATATCACAACCTGTTCCAAGAGTTCAACAGAACTTGTGTTTGTTGGAGAGGAGCTTGATTATTTTGCTCTCAAGTACACTGCACCGGTTTCAAAATCAAACCTGAATTCATGCAAAGAGGCTTGTTTAGGAAACTGCTCATGCCTTGTGCTTTTCTTTGAAAACAGCACTGGAAGATGCTTTCATTTTCATGAGACTGGGAGTTTCCAACGCTCTAGGGGGGGCACTGGTGGCTATGTTTCATTCATGAAGATTTCAATTGATGGTGATGGACATGGCAACAGAAATGGTAGGAATGACACGGTGCTAGTTGTTGTCATAGTAGTTCTCACAGTTCTTGTTATAGTTGGTCTTATAACAGGATTCTGGTACTACTATAAGAAAAAGAAGAATGTTGCTAAGTATCCTTTTGAAGACACTTTGGAGGAAGATGATTTCTTGGACGGTCTCTCTGGTATGCCTGCTCGTTTTACTTTTAGTGCTCTTTGTAGAgcaactaaggatttctccacaaaaattggagaaggagggtttggctcagtgtatctaggtgtgcttgaagatgaaactcaattggctgtgaaaaaattggaaggtgttggacaaggtgcaaaagagttcaaagcagaagtgtctataattggaagtattcatcatgttcatttggtgaagctcaaaggcttctgtgctgagggtcctcatcgccttcttgtctatgaatacatgtcaaggggttccttggacaaatggatcttcaagaacagtgagaacactttcttgttgaactgggacacaaggtacaacattgcaataggcactgcaaaagggttggcctatcttcatgaggagtgtgaagtgaggatcatccactgtgatatcaagccacaaaatgttcttcttgatgataacttcactgccaaggtttctgattttggattggccaaactaatgagccgagagcagagccatgtgttcacaactctaagaggcacaagaggatatctagcaccagaatggatcactaactatgcaatttcggagaagagtgatgtgttcagctatggcatgttgttgcttgagatagttggagggaggaagaactATGATCAATGGGAAGGAGCAGAGAAGGCACATTTTCCTTCTTATGTGTTCAGAATGATGGAGGAAGGGAAACTGAAAGAGGTTCTTGATCCAAAGATAGATATTGATGAGAAGGATGAAAGGGTTGTAGTTGCTCTAAAAGTTGCTCTTTGGTGCATACAGGATGATGTGAATTTGAGGCCTTCCATGACTAAGGTAACTCAAATGCTTGAAGGTTTGTGCCTTGTGCCTGATCCACCCTCATTATCTCAATCAGGTACATTTTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCTACTAATTCATCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCGTGTGTTCAATTATCAGGACCAAGATGA | 2691 | 0.3151 | MVSLPFFSRQKLRLSHYQKQLGVRFYPIIKIEANVSTISSHGENAENSYGLIIPVTCLRTFLLIFLLLLLHSNIASATQWKIRYEIMGSFRSGILFFFVLLLFRTCLANDQHIRQIYPGFSASRPDWRDHNGLFLLSNSSVFALGFLTALDVSLFVLVVIHLSSNKVVWTANRGLLVGDSDKFVFDHSGNAYLEGGNGVVWATNTTGQKVKAMELLDSGNLVLLGENGTTIWQSFSHPTDTLLPGQAFVEGMSLKSFHNSMNLCHYLSYMKGDLVLYAGFETPQVYWSLSEEVYRNRSSKNNTAKVHSLSLVNNSWCFYDMNGGLLWKTVFSEHSDSKSLWSATLDPNGAISFYDLNKGRSHNPEAVKVPQDPCGIPEPCDPYYVCFFENWCVCPGPLKPFNCKPPNITTCSKSSTELVFVGEELDYFALKYTAPVSKSNLNSCKEACLGNCSCLVLFFENSTGRCFHFHETGSFQRSRGGTGGYVSFMKISIDGDGHGNRNGRNDTVLVVVIVVLTVLVIVGLITGFWYYYKKKKNVAKYPFEDTLEEDDFLDGLSGMPARFTFSALCRATKDFSTKIGEGGFGSVYLGVLEDETQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMSRGSLDKWIFKNSENTFLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIVGGRKNYDQWEGAEKAHFPSYVFRMMEEGKLKEVLDPKIDIDEKDERVVVALKVALWCIQDDVNLRPSMTKVTQMLEGLCLVPDPPSLSQSGTFSAFMKLSSGEATNSSGQASFFSNVPMSCVQLSGPR | 896 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca10g00095 | 896 | ProSiteProfiles | PAN/Apple domain profile. | 411 | 492 | IPR003609 | - | |
Cca10g00095 | 896 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 694 | 706 | IPR008271 | GO:0004672|GO:0006468 | |
Cca10g00095 | 896 | PIRSF | SRK | 87 | 893 | IPR024171 | GO:0004674 | |
Cca10g00095 | 896 | CDD | STKc_IRAK | 579 | 846 | - | - | |
Cca10g00095 | 896 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 164 | 289 | IPR036426 | - | |
Cca10g00095 | 896 | Gene3D | Transferase(Phosphotransferase) domain 1 | 648 | 847 | - | - | |
Cca10g00095 | 896 | Pfam | D-mannose binding lectin | 167 | 248 | IPR001480 | - | |
Cca10g00095 | 896 | Gene3D | - | 129 | 237 | IPR036426 | - | |
Cca10g00095 | 896 | ProSitePatterns | Protein kinases ATP-binding region signature. | 579 | 602 | IPR017441 | GO:0005524 | |
Cca10g00095 | 896 | ProSiteProfiles | Protein kinase domain profile. | 573 | 846 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca10g00095 | 896 | SUPERFAMILY | Protein kinase-like (PK-like) | 558 | 844 | IPR011009 | - | |
Cca10g00095 | 896 | CDD | B_lectin | 131 | 238 | IPR001480 | - | |
Cca10g00095 | 896 | SMART | serkin_6 | 573 | 843 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca10g00095 | 896 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 | 88 | 896 | - | - | |
Cca10g00095 | 896 | SMART | blect_4 | 126 | 238 | IPR001480 | - | |
Cca10g00095 | 896 | Pfam | Protein kinase domain | 576 | 841 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca10g00095 | 896 | ProSiteProfiles | Bulb-type lectin domain profile. | 120 | 236 | IPR001480 | - | |
Cca10g00095 | 896 | CDD | PAN_AP_plant | 410 | 492 | - | - | |
Cca10g00095 | 896 | Gene3D | Phosphorylase Kinase; domain 1 | 547 | 647 | - | - | |
Cca10g00095 | 896 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 88 | 896 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca10g00095 | Cca-Chr10 | 1002555 | 1007394 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca10g00095 | 512 | 853 | Receptor kinase-like Gene Family | AT5G20050 | 43.767 | 1.07e-87 | 285 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Cca10g00095 | Pkinase | 1.5e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca10g00095 | - | - | gmx:100786024 | 1410.59 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca10g00095 | 10 | 1002555 | 1007394 | Cca10g00095 | 10 | 1002555 | 1007394 | ECH |