Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00068 ATGCCAAAGCTGGTTCTCAAAGTTGGGAGCAGACCTCCTTGGGTTGGTCTTGCAGCTGCAGTTTGGACTCAAATAGCATCTGGCAATGCATACAACTTCCCACTCTATTCCTCTGCCCTCAAATCAGTGTTGGGTCTCAACCAGCAACAGGTCACTATTCTTGGAGTGGCCAATGATGTTGGGGAGAACATGGCTCTGCTTCCTGGTATTGCCTCCAACAAGTTCCCTCCTTGGGCTTTGCTTCTGCTTGGTTCTCTCCTTTCTTTATTTGGCTATGGCCTTATCTGGCTTGCTGTTAGCCAAACTCTTTCGCAATTCCCCTATCTCCTGTTATGGCTTGCCCTCTGTGTTGCCACTAACAGCAGTGCGTGGTTTAGTACAGCCGTGCTTGTCACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACCATCTCTGGCATTCTTAAAGGTTATGCGGGGATTAGTGCTGCAGTATACACCTTAATATATAGCATGTTGCTGAAATCATCTGCTTCTGAATTACTCTTGTTCCTGGCAATTGGAATTCCTGTCGTATGTTTAGTTATGATGTACTTCGTTCGGCCTTGTACCCCTCCTTCTGGGGAAGACTCTTCGGTGCATGTGCATTTTATTTTTGTCCAAGTTGCAAGTGTTTTACTTGCCTCCTATCTTGTTATCACCACAATAGTGAGTGACATGGTCTCTATAGATGATGCTGTATCCTACATCTTGGTTGCTATAATGGTTATACTTCTCATGACTCCCCTTGCAATTCCTGTCAAAATGACACTATTTCCTGCTAATTCAAAGAGGAGCAACGTTCCACTGCTTGGTTCTTCAGATCAGTTGCTAACAGGTGATGATGTTTCAACTCAAACAAGTCCATTGCTGACACCATCTTCCTCAGCTGCCAATCTTGGAAGTTTTCATGAAAGTGAGGATGCTTCAGATGTTGAGACACTCATAGCAGAAGGGGAGGGAGCGATAAGGAAGAAAAGGAGGCCTAAGAGGGGTGATGATTTCAAGTTCCGTGAAGCTTTGGTCAAGGCTGATTTCTGGCTTCTCTGGTTTGCTTATTTTCTTGGGGTTGGATCAGGAGTAACAGTTCTCAATAACTTGGCTCAAATTGGAGTTGCCTTAGGTGTAGAAGATACAACCATATTGCTTTCGGTCTTCAGCTTTTGCAATTTTATGGGTCGTCTTGGTGCTGGTATTGTTTCTGAACACTTTGTTAGGTTGATAACACTACCGAGAACATTTTGGATGACAAGTACACAAATAATCATGATCGTAGCTTTTTTACTTTATGCTTCAGCTCTTGATGGCACTCTTTATGCTGCAACGGCTTTGCTTGGGATCTGCTATGGGGTTCAATATTCTATAATGATCCCAACTGTCTCTGAGCTTTTTGGTTTGAGGCACTTTGGTGTTATCAGTAGCGTCATGATGCTAGGAAATCCAATTGGTGCCCTTATTTTCTCAGTTTTCCTTGCTGGCAACGTGTATGATGCAGAAGCTGCAAATCAAGGAAACTCCACCTGCTATGGTGCAACTTGCTTCAGGCTCACTTTTCTGGTTTTGGCTGGTGTCTGTGGACTTGGTACCATCTTGAGTATAATTTTGACACTCAGAATACGACCAGTATATCAAATGCTGTATGCTGGTGGTTCATTTCGTCTATCTCAGACTTCAAACCACTGA 1701 0.438 MPKLVLKVGSRPPWVGLAAAVWTQIASGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENMALLPGIASNKFPPWALLLLGSLLSLFGYGLIWLAVSQTLSQFPYLLLWLALCVATNSSAWFSTAVLVTNMRNFPLSRGTISGILKGYAGISAAVYTLIYSMLLKSSASELLLFLAIGIPVVCLVMMYFVRPCTPPSGEDSSVHVHFIFVQVASVLLASYLVITTIVSDMVSIDDAVSYILVAIMVILLMTPLAIPVKMTLFPANSKRSNVPLLGSSDQLLTGDDVSTQTSPLLTPSSSAANLGSFHESEDASDVETLIAEGEGAIRKKRRPKRGDDFKFREALVKADFWLLWFAYFLGVGSGVTVLNNLAQIGVALGVEDTTILLSVFSFCNFMGRLGAGIVSEHFVRLITLPRTFWMTSTQIIMIVAFLLYASALDGTLYAATALLGICYGVQYSIMIPTVSELFGLRHFGVISSVMMLGNPIGALIFSVFLAGNVYDAEAANQGNSTCYGATCFRLTFLVLAGVCGLGTILSIILTLRIRPVYQMLYAGGSFRLSQTSNH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00068 566 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 566 - -
Cca10g00068 566 Gene3D MFS general substrate transporter like domains 11 204 IPR036259 -
Cca10g00068 566 SUPERFAMILY MFS general substrate transporter 6 198 IPR036259 -
Cca10g00068 566 CDD MFS_Mch1p_like 12 535 - -
Cca10g00068 566 Gene3D MFS general substrate transporter like domains 328 550 IPR036259 -
Cca10g00068 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 566 - -
Cca10g00068 566 Pfam Nodulin-like 13 260 IPR010658 -
Cca10g00068 566 SUPERFAMILY MFS general substrate transporter 242 547 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00068 Cca-Chr10 771557 774813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00068 1 566 Nodulin-like Gene Family AT1G80530 61.728 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00068 - - qsu:112016545 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00068 10 771557 774813 Cca10g00068 10 771557 774813 ECH