Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00062 ATGGTGGTGTCGGAGACAGGGCCTGCACACCTTGAGGATGTCGGGAAACTGTCCATAATGCGGCGAACAGGGTTGCCGGCGCGTGACCTTAGGGTCCTCGATCCCATGCTTTCTCACTCTTCTTCCATCCTCGGACGCGAAAGAGCCATTGTCGTTAACTTAGAACACGTCAAAGCCATCATCACTGCCTCTGAGGTCCTCATCATCAACTCCTCCAACCCTTTCTTTCAAACCTTCCTTCAAGATCTTCACACCCGTCTCACTAATCAAACTCCCTCCCCGTTACCTTTTGAGTTCAGAGCACTTGAAACGTGTATTGAATCTGCTTGTAGGTGCCTTGAATCTGAGACTTCAACATTGGAGAAAGAGGCTTACCCAGCTTTAGATGAGTTGACCTCTCAACTGAGCACACTCAATCTTGAACGTGTAAGACAGATCAAGAGTCGTTTGGTTGCACTTTCCGGTCGTGTGCAGAAGATGCCAACATGTACCAAATCTAAGCAAGTCTTGAAGTTGTTCAATACCTCAAAGAATATGTAG 540 0.4759 MVVSETGPAHLEDVGKLSIMRRTGLPARDLRVLDPMLSHSSSILGRERAIVVNLEHVKAIITASEVLIINSSNPFFQTFLQDLHTRLTNQTPSPLPFEFRALETCIESACRCLESETSTLEKEAYPALDELTSQLSTLNLERVRQIKSRLVALSGRVQKMPTCTKSKQVLKLFNTSKNM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00062 179 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 92 160 IPR039204 -
Cca10g00062 179 Gene3D - 1 71 - -
Cca10g00062 179 Gene3D Magnesium transport protein CorA, transmembrane region 72 167 - -
Cca10g00062 179 PANTHER MAGNESIUM TRANSPORTER MRS2-F 1 90 - -
Cca10g00062 179 PANTHER MAGNESIUM TRANSPORTER MRS2-F 92 160 - -
Cca10g00062 179 CDD Mrs2_Mfm1p-like 1 160 IPR039204 -
Cca10g00062 179 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 90 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00062 Cca-Chr10 734458 736302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00062 1 160 MRS2 Gene Family AT3G19640 49.057 8.02e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00062 - K16075 egr:104418017 220.705