Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00060 ATGAGGCGAAAGGGCGTGGGAGTGAAGAGTTGGATGGTGGTGTCGGAGACAGGGCCTGCACACCTTGAGGATGTCGGGAAACTGTCCATAATGCGGCGAACAGGGTTGCCGGCGCGTGACCTTAGGGTCCTCGATCCCATGCTTTCTCACTCTTCTTCCATCCTCGGACGCGAAAGAGCCATTGTCGTTAACTTAGAACACGTCAAAGCCATCATCACTGCCTCTGAGGTCCTCATCATCAACTCCTCCAACCCTTTCTTTCAAACCTTCCTTCAAGATCTTCACACCCGTCTCACTAATCAAACTCCCTCCCCGAGGAGCAATGACATGGATGGTAAAGATTCGTTGCAAGGTGGTAAAGGTTCCGGAAACGGTTCACCTGTGAGAATATCTGAGGACTCTGTTGCATTTCACGTAAGAGCGGATAGCTCTAAAATCAATGCAGAGGTTGTAACGGGAAAACCAGCTCCTAAGCAGTTACCTTTTGAGTTCAGAGCACTTGAAACGTGTATTGAATCTGCTTGTAGGTGCCTTGAATCTGAGACTTCAACATTGGAGAAAGAGGCTTACCCAGCTTTAGATGAGTTGACCTCTCAACTGAGCACACTCAATCTTGAACGTGTAAGACAGATCAAGAGTCGTTTGGTTGCACTTTCCGGTCGTGTGCAGAAGATAGCCGATGAATTAGAACATTTGTTGGACGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTTAATGGTCGTTTAATGGAGCAGGCATCATTTAAAGAAGGGAACAATTACGAATTTGAAGAGAACGATCAAAGTGATGAATCATATTCGGAAAGGTTTGACAAATTCCCTTATCATAAACTTGATGTTGAGGAATTGGAAATGCTTCTAGAAGCATATTTTGCACAGACTAATGGAATCTTGCAAAGATTGTCTAGTTTGAGTGAGTACGTGGATGACACAGAGGACTACATCAACATAATGTTGGATGATAAGCAAAATCAGCTTCTGCAGGTAGGAATAACATTCAACACCCTAAGCATGATACTCAATGCCGGTATTGTGGTCGTAGGATTGTTTGGCATGAATATTCACATCGAACTCTTTGATAGTACACCTCGTCAATTTTGGGCCACAACTTATGGTACATTGGGAGGATGCATATTTCTTTTCCTTGTATGTTTATGGTGGGGGAAGAAAAGATACTTACTCTCTCAATAG 1221 0.4382 MRRKGVGVKSWMVVSETGPAHLEDVGKLSIMRRTGLPARDLRVLDPMLSHSSSILGRERAIVVNLEHVKAIITASEVLIINSSNPFFQTFLQDLHTRLTNQTPSPRSNDMDGKDSLQGGKGSGNGSPVRISEDSVAFHVRADSSKINAEVVTGKPAPKQLPFEFRALETCIESACRCLESETSTLEKEAYPALDELTSQLSTLNLERVRQIKSRLVALSGRVQKIADELEHLLDDDNDMAEMYLTQKLNGRLMEQASFKEGNNYEFEENDQSDESYSERFDKFPYHKLDVEELEMLLEAYFAQTNGILQRLSSLSEYVDDTEDYINIMLDDKQNQLLQVGITFNTLSMILNAGIVVVGLFGMNIHIELFDSTPRQFWATTYGTLGGCIFLFLVCLWWGKKRYLLSQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00060 406 Gene3D Magnesium transport protein CorA, transmembrane region 86 336 - -
Cca10g00060 406 MobiDBLite consensus disorder prediction 99 129 - -
Cca10g00060 406 Gene3D - 3 83 - -
Cca10g00060 406 PANTHER MAGNESIUM TRANSPORTER MRS2-F 2 404 - -
Cca10g00060 406 CDD Mrs2_Mfm1p-like 11 401 IPR039204 -
Cca10g00060 406 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 404 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00060 Cca-Chr10 725040 728343 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00060 10 404 MRS2 Gene Family AT3G19640 46.652 2.83e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00060 - K16075 gmx:100808805 612.453