Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00047 ATGCCTTCTGCAGAATCATCATCACCTTCGTCCCAAACAATATGTGTCACCGGCGCCGGTGGCTTTATCGCCTCTTGGATGGTCAAACTCCTCTTGGAGAAAGGCTACACCGTCCGTGGAACCCTCAGAAACCCAGATGATCCCAAAAACGGACACTTAAAAGAGTTCCAAGGAGCCTCCGAGAGGCTAACTCTTCACAAAGTTGACCTCCTTGATCTTGACTCCGTTAGATCAGTCATCAACGGCTGTGATGGTGTCTTTCACACTGCTTCTCCTGTCACCGATAACCCAGAAGAAATGGTGGAGCCAGCAGTGAATGGAGCGAAGAACGTGATCATTGCAGGTGCAGAAGCAAAAGTGCGACGTGTGGTGTTCACCTCATCAATTGGTGCGGTGTATATGGACCCCAGTAGAAGCATCGATGAGGTGGTTGACGAGTCTTGTTGGAGTGACTTAGAATATTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAAGCTGTGGCTGAACAAGCGGCATGGGACACGGCAAAAGACAAGGGTGTGGACTTGGTTGTGGTGAACCCGGTTTTGGTTCTTGGACCGTTGCTACAACCTACCATCAATGCTAGCACAATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACTTATGCAAATGCCACACAGGCTTATGTTCATGTTAGGGATGTGGCTTTGGCTCACATACTTGTTTATGAGAAGCCTTCTGCTTCTGGTAGATACTTGTGTGCTGAATCCTCCCTGCACCGTGGAGAATTAGTTGAAATTCTGGCCAAGTATTTTCCAGGGTACCCTGTTCCAACCAAGTGTTCAGATGAAAAGAATCCGAGAGCAAAACCCTACACTTTTTCAAACCAAAAGCTGAAGGATTTGGGATTGGAATTCACTCCAGTGAGTCAATGCCTATATGAAACTGTTAAGAGCCTGCAGGAGAAAGGGCATCTTGCTGTTCCTCCAAAGCAGGAAGATTCAACTACAGTGAAATCCTAA 1014 0.4714 MPSAESSSPSSQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKEFQGASERLTLHKVDLLDLDSVRSVINGCDGVFHTASPVTDNPEEMVEPAVNGAKNVIIAGAEAKVRRVVFTSSIGAVYMDPSRSIDEVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDTAKDKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPGYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLAVPPKQEDSTTVKS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00047 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 327 - -
Cca10g00047 337 Gene3D - 3 337 - -
Cca10g00047 337 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 327 - -
Cca10g00047 337 CDD FR_SDR_e 15 301 - -
Cca10g00047 337 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Cca10g00047 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00047 Cca-Chr10 553823 556708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00047 12 277 Monolignol Biosynthesis Gene Families AT1G80820 75.188 4.49e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00047 K09753 - gmx:100789070 622.854