Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00044 ATGATCATATATGTGCTGTCATTTCAGGCCTCTGGTGCCTTAGTGGAGGAGCTGAAGCGGGTGACTGCAGAAAACAAGAAGTTGACCGAAATGCTCACGGAGATGTGTGAGAACTACAACGCTTTGCGAAGCAATTTGATGGAATATATGAGGAAGAATCCTGAGAAGGAGCTCAGTTCATCCAAGAAAAGGAAATCTGAAAGCAGCAACAACAACAATAGTATTCCAATGGTAGTCAATGGAAACTCTGAAAGCAGCTCAACTGATGAAGAATCATGCAAGAAACCAAAGGAAGAAATCAAGACAAAAGTTTCAAGAGTTTCTGTGAGGACCGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGGTATCAATGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAGTGCTCTTTTGCTCCAAGCTGCCCGGTAAAAAAGAAGGTTCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATCCCCACCCTTCTCAAATGGAGGTAACAACAAGTTCCAACCGTTGTGTGACCCTAGGTTCAGTACCCTGTTCAGCTTCTCTTAGCTCTTCTGCACCAACAGTTACCCTAGACTGGACAAAATCCAAGTCAAGCACCAAAAGCGAGTCTAAGAATATAATTCCCAAAATCGATTCACCAGAAGTACCGCAGGTTTTGGTAGAACAGATGGCTACCTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTAGTTGCAGCCATCTCTGGAAAAATGTTGCACAATAATTAG 822 0.4307 MIIYVLSFQASGALVEELKRVTAENKKLTEMLTEMCENYNALRSNLMEYMRKNPEKELSSSKKRKSESSNNNNSIPMVVNGNSESSSTDEESCKKPKEEIKTKVSRVSVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPSQMEVTTSSNRCVTLGSVPCSASLSSSAPTVTLDWTKSKSSTKSESKNIIPKIDSPEVPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00044 273 SUPERFAMILY WRKY DNA-binding domain 116 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g00044 273 SMART WRKY_cls 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g00044 273 ProSiteProfiles WRKY domain profile. 115 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g00044 273 Gene3D WRKY domain 100 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g00044 273 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 9 273 IPR044810 GO:0003700
Cca10g00044 273 MobiDBLite consensus disorder prediction 53 106 - -
Cca10g00044 273 MobiDBLite consensus disorder prediction 88 106 - -
Cca10g00044 273 Coils Coil 18 52 - -
Cca10g00044 273 Pfam WRKY DNA -binding domain 121 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g00044 273 MobiDBLite consensus disorder prediction 65 87 - -
Cca10g00044 273 PANTHER TRANSCRIPTION FACTOR 9 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00044 Cca-Chr10 499031 501368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00044 11 273 WRKY Transcription Factor Family AT1G80840 59.636 6.52e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca10g00044 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00044 - - gmx:100798375 425.631