Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00015 ATGGCTCACATGGAAGCCATAGAGAATTTTGAAGCCGCCAGGAAGTGCTTGCAAACTAGCTTAGAAAAATCAACTGCTATTGCTTCTGCATTAGACGAATCAGGATCAAGATTGGAGCTACTTAACCAGAGATTTCGATCCTTGGAAGATGCAACCTCAGTGCAAAAATGCTCGCTTGTTGACATTGGAGACCACATAGACACCGTTCTTTGCTCCGCAGCTGCAGTCCTCAAGGTGTTTGAAGCAGTTCATGAGCTCGAGGAGTCTTTCTTGGCCCACCCCACCTGTGATCTATGCACCTATATCTCAAACACAAAGAAGCTTGAAGAAGCACTGAAGCTTCTCACTGATAATTCCAGGTTAGTACTTGGGTGGTTGCACGGAGTTTTTGAGTTCTTACTAGACAAAACAATCACCAACGAGCGCTGCGTATTGAATGTGAGGAAATCTTTGAGAATACTACAAGAATTGAAGGTCATGGAAGAAGGTGCTCGTGGTGATGGAGGTCTCCTCACTTCTGCCTTTGACAGACTAGAGACTGAGTTCCACAGGCTTCTCATGGAGAACACTTTGCCAGATTCTGTAACACACAAGTTGCAGGCCATAGTTGAAAGATTACACGCAAATCACAGGCTGGACAAGTGTAAATCCATATATGTTGAAGTTCGAGGTATGAATGCTCGAAAATGTGCGGAGAGTATAGATTTGAGTTACCTTGAGATGCCAACAGCTGAATTTGAGGATTTGCATGTTATTGGGAGCTACATAGACCAATGGGGCCAGCATTTGGAGCTGGCTGTGAAGCATCTTCTTGAGATCGAGTACAAGCTCTGTAGTAATGTCTTTGAGAAAATTGGTCAAGAAACTTGGATGGAATGTTTTGCAAAGATTGCTATTGACACAGGAATTCTCTCTTTTCTCCAATTTGGAAGCAACGTTGCTGCGAGTAAAAACGACCCCATCAAGTTGTTGAAGCTGCTGGACATATTCAGAGTCCTAGATGGCCTAAGACTAAAATTCAACCAACTTTTCAATGGGAAAGCTTGTGAAGAAATTAGAATTGTGACAAAGGATCTTGTGAATGGAGTTGTCAACGGTGCTGGTGAGATATTCTGGCAGCTTCCAGCACAAGTGAAGTTGCTAAGGCCAAGTTCTCCTCCCACGGATGGCAGCGTTCCCAGGGTGGTGAGTTTTGTAACTGATTACTGTAATCAGTTACTTGGGGATACCTATAGACCACACTTGACACAGGTTCTGAAAATTCATATAAGCTGGAGAAAGGAAGTGTATGAAGAGGGTATTGTTTTCACCCAAATTTATAACATAATTAAGGAAATTGCTGTTAATTTAGATGCTTGGTCAAAGGCCTATGAAGACATCACTTTGTCTTGCCTTTTTATGATGAATAACCACTGCCATTTCTACAATTTGCGGGGTACTGCTGTTGGGAATCTGATGGGAGATTCTTGGCTAAGAGCTCATGAAGAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGGGAAAACCTTGTACCTATTCTTGTAGTTCGAAAAGACTTGCTGTCGTCCTCCGTGACAGCCCAAGATTTTGTCCAGAGACTAAATGCTTTCAATGTAGCTTTTGACGAAAGGTATAAGAAGCAATCTAACTGGGCCATCAGTGATGAGGTGTTGAGGGAAAATATATGCAAGCATTTGGTGGAGGGCATTGTACCAACCTATAGGGCCTATGTGAAGAACTACAGCTTGTCAATTGAAAACGATGCCAAGCATATAAAATATTCAGCGCAGATTTTAGAGAACATGATTAGGTCTTTATTTCAGCCCAAGCTGAGCAAAAATCCCAAAACCGGCGAGGTTAAGTTTGATGACATGGTGGGCATGGTCACATTGAACTCCTACCCAGGAGGAGCATGGAGTGGTATCAGAGGGAAGCCAGGTGGTGGATATGGAAGGAGACACGGATGTCCAGTGCCTCAAGAGAGACAAGAGAGCAACCCCGTCGGAGAAACAAACAACATAAACCAAGCAAGAGAAGACAATAAGACCAACTCGTGTATATGGTGGAGAACATCATGCAGTTGCAATGCTTGA 2103 0.4313 MAHMEAIENFEAARKCLQTSLEKSTAIASALDESGSRLELLNQRFRSLEDATSVQKCSLVDIGDHIDTVLCSAAAVLKVFEAVHELEESFLAHPTCDLCTYISNTKKLEEALKLLTDNSRLVLGWLHGVFEFLLDKTITNERCVLNVRKSLRILQELKVMEEGARGDGGLLTSAFDRLETEFHRLLMENTLPDSVTHKLQAIVERLHANHRLDKCKSIYVEVRGMNARKCAESIDLSYLEMPTAEFEDLHVIGSYIDQWGQHLELAVKHLLEIEYKLCSNVFEKIGQETWMECFAKIAIDTGILSFLQFGSNVAASKNDPIKLLKLLDIFRVLDGLRLKFNQLFNGKACEEIRIVTKDLVNGVVNGAGEIFWQLPAQVKLLRPSSPPTDGSVPRVVSFVTDYCNQLLGDTYRPHLTQVLKIHISWRKEVYEEGIVFTQIYNIIKEIAVNLDAWSKAYEDITLSCLFMMNNHCHFYNLRGTAVGNLMGDSWLRAHEEYKDYYAALYLRNSWENLVPILVVRKDLLSSSVTAQDFVQRLNAFNVAFDERYKKQSNWAISDEVLRENICKHLVEGIVPTYRAYVKNYSLSIENDAKHIKYSAQILENMIRSLFQPKLSKNPKTGEVKFDDMVGMVTLNSYPGGAWSGIRGKPGGGYGRRHGCPVPQERQESNPVGETNNINQAREDNKTNSCIWWRTSCSCNA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00015 700 MobiDBLite consensus disorder prediction 653 680 - -
Cca10g00015 700 SUPERFAMILY Cullin repeat-like 76 610 IPR016159 -
Cca10g00015 700 Gene3D Exocyst complex component Exo70 134 620 - -
Cca10g00015 700 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 194 617 - -
Cca10g00015 700 Coils Coil 31 51 - -
Cca10g00015 700 Pfam Exo70 exocyst complex subunit 258 607 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca10g00015 700 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 194 IPR004140 GO:0000145|GO:0006887
Cca10g00015 700 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 194 - -
Cca10g00015 700 PANTHER EXOCYST COMPLEX PROTEIN EXO70 194 617 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00015 Cca-Chr10 230448 234510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00015 6 613 EXO70 exocyst subunit family AT4G31540 48.148 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00015 K07195 - gmx:121175138 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00015 10 230448 234510 Cca10g00015 10 230448 234510 ECH