Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca10g00003 | ATGAGAAAATTATCCTGTTGGTCTCAACTACCAAGTATTGAACTTGGTGGAGAGCTTGACCACAATATTGGCTATTTTATGTTCAAACCATTTCTATTTCTTATGCTACTTGTTCAGAACAAATACAAGGTAAAAGAATCGTTGATCATAGTCGTTGATAGTTGTGGTTACTTCCGATTCTATTTAGTATTTCGAACTTCTGAAGGGTTTGTACCCGATTGTCCAGCGTTTAGCCGAACGGCTGAACTGCTAGTTGATGGTGGAATCCTGGCACAGGTTTTAGAAATGCAATATTTGGTTGGTAAAACAAATGTGAAGAATAAAGAAAATGAAACTGCAGGCACAGATTCCAGAAAAGATATCAGGGAGGTACCTAATCAATCAGGGTTTCAGTTGCCTGGTCTGATTCAACTGAATGGAATTGCCCTACCCCAGATTCCAAATTTAGGTGTTTTTCCTACTATGGACACGGAATTTCTTAGAGCACGTTCTTTTATGTTAGAAAAAATATATAACATACTATTGCAGCGGAACCAGCATCCAGTTACAGAAGCACATAGAAAGAAGGTTAAGGATCTTGCAAAGCGTCTTGAAGAGGGCATGTTAAAATCTGCTATCTCTAAGGAGGACTACATGAACTTGGACACTCTAGAGAGCCGCTTATCTAATTTCTTTAGGCTGTCATCTATGAATAATCACAACCAACAACATCCACAGCTTGTTAGCTCTTCTCCGATTGGTACAATGATACCAACCCCTGGTATGTCAAATGTTACAAATTCAACCATGAACATAGCATCTTCTGTGGATGCCTCAATGATTGCTGCCAGTGGAGTTAACAGCATAGCATCCTCATCTGTCAATAATGTAAGCATGTTACCAGCAGGTGGCATGCTTGGCAGCTCCTTAAATAGATCTGATGGTTTGTCTAATGGCTACCCACAGTCTTCTACAAATTTTTCCATTGCTTCAGGAGGAAATATGTCATTGTCACAATCACAGCCACCACGGCATCAGAAGCTGCAAGATAGTGACCACAACAATCATGCATTGCACAACCTTGGCAGTCAAATGGAGGGTGGAATGAGATCTGATTTGCTGCAAAATTCATTTGCATATCCAAATGGTTCTATAAATAATGGGCTAGGCTTGATTGGAAACAACATACAACTTGCAAATGAACCGGTCACTGATGACTATGCTTCAGCGTACACCAATTCCCCTAAACACTTACAGCAGCACCTGGATCAAAATCAGCAGCAAGTAATGCAGGGTGAAGGATATGGATTGATTAATGTTGACACTTATAATTCTGGAAGCTTTTATGCATCTGCGGCATCATCTGGCTCTGTGATGAACACTCAGAATGTGAATGCAGTAAAACTTCCATCAATACCCGTTACCAGCTCACTGATAAGTGGTCATTCAAATTTGCACAGTATGCATCAGACTTCTCAACAAAACTCTCAAGCAATTAATTCATTGAAAAATTTAAAATTCCAGTCTTCATTTACTTCAAGAGATAGCCATGGGCATACTCAACAGCAATACCAGCCAAGACCCCAACAATGTAACCAGTCAGAGCGGTATGCTGCACAGCAATTTCAACTGAAGCTGCAAAGTCAACAATCTCAGCAATTGGTCAACAGTGATGCCTTCTCTCAAACTCAGCTCTCTTCCAATCTAGACAATCGAGTAAAGTCTGAGTCTGGAGTTGAAATGCATAAAGTGCTCAAATCTCAGCTTTCTGAACAGTTTCATGTATCTGAGATGCAGAACCAGTTCCAGCAGATTTCTTCTAAAGATTGCTCTAAGGTTGCTCAAAATCTGTCATTCTCCTCTGATCAGCATGACTCATTGTCATCATCACCACAAATTTCACAACAAATGTTGCACCCTCATCAATTGGTTTCAGAGTCTCAAAATAATTTTAGCTGTCTTTCAGTTGGATCACAATCCAAATCCATACTTATAAATCAATGGCCGCAATCGCAAGATGAAAACCACGTTCCTCAGGGTATGTCACGTGAGCAGCATCTCCCCATGGATTTTCATCAAAGAATAACAGGGCTAGATGAAGCTCAGTGCAATAATTTGTCATCAGGTGTATCTATTATTGGTCAACCTGTTGCTTCTAGAAACTCAACTGAGCTGCTAGACTCTAGTGGTGCTACAAAAAAGGCACACAGGAATCAACAAAGGTGGCTTTTATTTTTAATTCATGCTCGACGTTGTTCTGCCCCAGAAGGGCGATGTCAAGAACGCCATTGTTCTAGTGTGCAAAAGTTATGTAATCACATAGATGGATGCAGTATTCCTCATTGTCCTTATCCTCGTTGTCATCATACTAGGAAATTGCTTCATCATTTCATAAAATGCAAGAATCCACATTGCCCTGTTTGTGTTTTGGTAAGAAAGTATAGGCGTGCATTTCAACTTCAGCCCCGAATTCGGTCAGATCCCGAATCATGTTTGCCAATTGCATCAAATGGATCATGTGAATCCTATAATGTGGTGGGACCATCACCTAGATTGATCTCAAAGTCTTCTCTAGTGGTTGAAACTTCAGAAGAGCTACCCTCTCTAAAACGTATGAAAACTGAGCAGTGCACCCAGTCCACTAATCCTGAATATGACAATTCTACTGCATCTGTTCTTCCAAATTTTGAATCACAAGATTCAAAGGATACTCAGTGCCAAGCCTATCCCTGTGGTGATATGTCTATATCAACTAAATCTGAGCTTACTGAAGTTAAAGCAGAGGTTCTGGTGCATCCAATTcatgaaaatcttagcgagacaaaaatggacgaggataatgcacatgataaaaggcctgctggtaagcctgtcacatataacgagcctgctaatattgctaggccagaaaatgttaaaactgagaaagaaactggacaagataagcaagaaaatgtgacccaggcatctgaacatgcagctggaacCAAGTCTGGTAAGCCCAAAATAAAGGGGGTCTCATTGACTGAACTGTTCACTCCTAAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAAGTAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAATTGTGTGCTGTAGAGAAACTTACTTTTGAACCACCCCCTATTTATTGCACAACGTGTGGTGTACGGATTAAACGAAATAATATGTATTATACCATGGGTACTGGTGATACCCGGCATTATTTTTGTATTCCATGCTATAATGAGCCTCGTGGAGATACCATTGTTGTTGATGGGACTCCCTTTCCTAAGTCAAGGTTAGAAAAGAAGAAAAACGATGAGGAAACAGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGCGCCTTATTTAATGGTCGAAGAAATGATGGTGGACTAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGTGAGCGCAAGCCCTTACCCCAAAGTGCTGTTCTTGGAGCCAAGGATTTACCAAGAACAATTCTCAGTGACCACATAGAGCAACGGTTATTTAGGAGACTAAAGCAAGAAAGACAAGAGAGGGCTCGACTTCAAGGGAAAAGTTATGATGAGGTGCCTGGAGCTGAAGCTCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAGAAATTAGAAGTTAAACAGCGGTTTTTGGAGATTTTTCAGGAAGAGAACTACCCAACAGAATTCCCATATAAATCAAAGGTAGTTCTGTTGTTTCAGAAGATTGAAGGCGTGGAAGTATGCCTCTTTGGCATGTATGTTCAAGAGTTTGGATCTGAATCTTTATTTCCAAATCAACGTCGGGTTTATCTTTCATATCTGGACTCTGTTAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACCGGAGAGGCTCTGAGAACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAGTATTGCAAGAAACGTGGTTTTACAAGCTGCTACATATGGGCATGTCCTCCACTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTACCTGTCCATGTTAAGAAAAGCTTCCAAGGAGAATATTGTGGTTGAGCTCACGAACTTGTACGATCATTTCTTTGTATCTTCTGGTGAATGTAGGGCTAAGGTTACAGCTGCTAGGCTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTACGCCAAGAAGAAGATGGAAGAAAACAAAATAAAAAAGGAACAACTAAGAAGACTATAACAAAAAGGGCTCTAAAAGCATCTGGTCAGTCAGATCTTTCTGGAAACGCCTCAAAAGATATTCTCCTAATGCACAAACTTGGCGAAACCATTTCCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCACTCATTGTTGTATTCTAATGGTGTCTGGGAACCGTTGGGTTTGCAGCCAATGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACTAAAGCATGAAGAGAGAGAACGGCATCCTATTAACCAGAGGGAGAAACACACCCTTTATCCTGTGGAAATTACTGAAGTACCCACTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTCTTTGACACTAGGCAGGCTTTTCTGAGTCTCTGCCAGGGAAATCATTATCAGTATGATACTCTAAGGCGGGCCAAGCATTCCTCTATGATGGTTCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTACTACATGTTATATTTGCCGTCTTGACATAGAAACAGGTCAAGGTTGGCGATGTGAGGTTTGCCCTGAATATGATGTGTGCAATGCTTGTTATCAAAAGGAAGGTGGCACTGATCATCCTCATAAATTGACAAATCACCCGTCAATGGCAGATCGTGATGCTCAAAACAAGGAAGCAAGGCAACTTCGAGTATTGCAGTTACGAAAAATGCTTGATCTTCTTGTCCATGCATCCCAATGTCGTTCTGCCCATTGCCAATATCCCAATTGTCGCAAGGTGAAGGGGCTTTTCCGTCATGGGATGCATTGCAAAACACGTGCCTCTGGAGGTTGTGTTCTATGCAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAGGAATCTGAATGCCATGTACCCCGTTGCAGAGATTTAAAAGAACACTTGAGGAGGCTGCAGCAACAGTCTGATTCACGGCGAAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGAAGAAGTTGCCAACAATTCTGGATGA | 5376 | 0.3956 | MRKLSCWSQLPSIELGGELDHNIGYFMFKPFLFLMLLVQNKYKVKESLIIVVDSCGYFRFYLVFRTSEGFVPDCPAFSRTAELLVDGGILAQVLEMQYLVGKTNVKNKENETAGTDSRKDIREVPNQSGFQLPGLIQLNGIALPQIPNLGVFPTMDTEFLRARSFMLEKIYNILLQRNQHPVTEAHRKKVKDLAKRLEEGMLKSAISKEDYMNLDTLESRLSNFFRLSSMNNHNQQHPQLVSSSPIGTMIPTPGMSNVTNSTMNIASSVDASMIAASGVNSIASSSVNNVSMLPAGGMLGSSLNRSDGLSNGYPQSSTNFSIASGGNMSLSQSQPPRHQKLQDSDHNNHALHNLGSQMEGGMRSDLLQNSFAYPNGSINNGLGLIGNNIQLANEPVTDDYASAYTNSPKHLQQHLDQNQQQVMQGEGYGLINVDTYNSGSFYASAASSGSVMNTQNVNAVKLPSIPVTSSLISGHSNLHSMHQTSQQNSQAINSLKNLKFQSSFTSRDSHGHTQQQYQPRPQQCNQSERYAAQQFQLKLQSQQSQQLVNSDAFSQTQLSSNLDNRVKSESGVEMHKVLKSQLSEQFHVSEMQNQFQQISSKDCSKVAQNLSFSSDQHDSLSSSPQISQQMLHPHQLVSESQNNFSCLSVGSQSKSILINQWPQSQDENHVPQGMSREQHLPMDFHQRITGLDEAQCNNLSSGVSIIGQPVASRNSTELLDSSGATKKAHRNQQRWLLFLIHARRCSAPEGRCQERHCSSVQKLCNHIDGCSIPHCPYPRCHHTRKLLHHFIKCKNPHCPVCVLVRKYRRAFQLQPRIRSDPESCLPIASNGSCESYNVVGPSPRLISKSSLVVETSEELPSLKRMKTEQCTQSTNPEYDNSTASVLPNFESQDSKDTQCQAYPCGDMSISTKSELTEVKAEVLVHPIHENLSETKMDEDNAHDKRPAGKPVTYNEPANIARPENVKTEKETGQDKQENVTQASEHAAGTKSGKPKIKGVSLTELFTPKQVREHITGLRQWVGQSKSKVEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIVVDGTPFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGLAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESLFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVELTNLYDHFFVSSGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDILLMHKLGETISPMKEDFIMVHLQHACTHCCILMVSGNRWVCSQCKNFQICDKCYEAELKHEERERHPINQREKHTLYPVEITEVPTDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCYICRLDIETGQGWRCEVCPEYDVCNACYQKEGGTDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAEEVANNSG | 1791 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 308 | 338 | - | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 503 | 522 | - | - | |
Cca10g00003 | 1791 | Gene3D | - | 1612 | 1664 | IPR043145 | - | |
Cca10g00003 | 1791 | SMART | TAZ_2 | 726 | 804 | IPR000197 | - | |
Cca10g00003 | 1791 | SMART | TAZ_2 | 1676 | 1754 | IPR000197 | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 931 | 995 | - | - | |
Cca10g00003 | 1791 | Gene3D | - | 1489 | 1548 | IPR043145 | - | |
Cca10g00003 | 1791 | SMART | zz_5 | 1612 | 1658 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | SMART | zz_5 | 1492 | 1536 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 308 | 357 | - | - | |
Cca10g00003 | 1791 | SUPERFAMILY | TAZ domain | 723 | 808 | IPR035898 | - | |
Cca10g00003 | 1791 | Gene3D | TAZ domain | 720 | 809 | IPR035898 | - | |
Cca10g00003 | 1791 | ProSitePatterns | Zinc finger PHD-type signature. | 1086 | 1157 | IPR019786 | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 862 | 881 | - | - | |
Cca10g00003 | 1791 | ProSiteProfiles | Zinc finger TAZ-type profile. | 1673 | 1756 | IPR000197 | - | |
Cca10g00003 | 1791 | SUPERFAMILY | RING/U-box | 1594 | 1662 | - | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 1439 | 1463 | - | - | |
Cca10g00003 | 1791 | SUPERFAMILY | FYVE/PHD zinc finger | 1119 | 1159 | IPR011011 | - | |
Cca10g00003 | 1791 | Coils | Coil | 1191 | 1211 | - | - | |
Cca10g00003 | 1791 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1493 | 1556 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | Gene3D | TAZ domain | 1670 | 1786 | IPR035898 | - | |
Cca10g00003 | 1791 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 1175 | 1611 | IPR031162 | GO:0004402 | |
Cca10g00003 | 1791 | PANTHER | ZINC FINGER, TAZ-TYPE-RELATED | 245 | 1791 | - | - | |
Cca10g00003 | 1791 | ProSiteProfiles | Zinc finger TAZ-type profile. | 723 | 804 | IPR000197 | - | |
Cca10g00003 | 1791 | Pfam | Histone acetylation protein | 1215 | 1433 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Cca10g00003 | 1791 | ProSitePatterns | Zinc finger ZZ-type signature. | 1498 | 1525 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | SUPERFAMILY | TAZ domain | 1675 | 1758 | IPR035898 | - | |
Cca10g00003 | 1791 | SMART | KAT11_2 | 1208 | 1505 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Cca10g00003 | 1791 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1110 | 1158 | IPR013083 | - | |
Cca10g00003 | 1791 | Pfam | Zinc finger, ZZ type | 1615 | 1656 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | Pfam | TAZ zinc finger | 733 | 801 | IPR000197 | - | |
Cca10g00003 | 1791 | Pfam | TAZ zinc finger | 1683 | 1753 | IPR000197 | - | |
Cca10g00003 | 1791 | CDD | PHD_HAC_like | 1085 | 1157 | - | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 931 | 949 | - | - | |
Cca10g00003 | 1791 | ProSitePatterns | Zinc finger ZZ-type signature. | 1618 | 1645 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | ProSiteProfiles | Zinc finger ZZ-type profile. | 1613 | 1666 | IPR000433 | GO:0008270 | |
Cca10g00003 | 1791 | SUPERFAMILY | RING/U-box | 1473 | 1543 | - | - | |
Cca10g00003 | 1791 | MobiDBLite | consensus disorder prediction | 865 | 881 | - | - | |
Cca10g00003 | 1791 | PANTHER | CBP/P300-RELATED | 245 | 1791 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca10g00003 | Cca-Chr10 | 34165 | 64882 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Cca10g00003 | HAT_KAT11 | 2.3e-29 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca10g00003 | K04498 | - | gmx:100800511 | 2878.58 |