Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02871 ATGGCGGATACGATACCTGCATGTTATGAGGTATCTGTACTTAATCCCAATCGAATTTGGCAAACTGATAATGTCCTTAAAACAGAACTTCCTATTCTCGCCTTTCAAATTGCCTTCGCAGTTGTGTTGTCTCGTTTTTTCTTCTTTATCTACAAACCTCTTCATCAACCTCGTCTTATTTCACAGATCTCTGTTGGTTTCCTACTAACTCCACCATTACTTGGGAGATACACAACAATTTTTGAGTTCATCTTTCCTGCAAAAGGGGTCCTTAATATTGAAGTCCTGGCAAACATTGGTCTCATCTATTATGCATTCCTTAGTGGTTTGGAGATGAACTTAAATACCATTCTACAAGTAAAAAAGAAGGCTGCAAGCATTGCAATTGCCGGGATCATCTTTCCCATGGTGATGGCACCAGGCCTGTATGCTCTACATCGAAAATTTTACAGCAGTAATGACAAAAATCGCCTTGAAGAAAGTACAAGTAATGCTTATTTACTTTGGACTTTAGTTCTCACTGTTACAGGTTTTCCTGTCCTAGCTCACACACTTTCTGAGCTCAAGCTCCTTTATACTGGTCTTGGTAAGGCTGCTTTAACAGCAGCCATGATCAGTGAGACCTATGGTTGGATTCTTTTCACTTTACTTGTTCCATTTTCAATTACTGGTAAGAGAGCTATTTACTCGGTGGTAAGCACGACATTATTCATTGTTGTCTGCATCTATCTGGTACGTCCAATCATTCTGCGGTATATTGATCGCAAGACAGACGAGGAGGAGTGGGATGATAACCAATTACTCTTTGTGGTGATGGGTTTTATAGCTTGTTCATGTATTACAGATATTCTTGGCACACATGGCATTGTTGGGGCTTTCGTATACGGATTAATTTTACCACATGGGAGATTTGCCGACTTGGTGATGTCAATTTCAGATGATTTTGCTGGCGGGTTTCTGGCACCACTCTTCTTTGGTGGCACCGGAATGAGACTTATATTGACCACGATTTTCTACCAGGCACATTGGCCCTTAACATTGTTGGTTATAGTCTTCTTGTGCGTTCCAAAGATTTTAAGCACTTTATTTGCCACTTTCGTCTTTGGTATGCAAGCTCGAGATGGATTATCCCTAGGCTTACTTCTGAATACCAAGGGTGCCATGGCTCTGATAATGCTAAACAATGCATGGGATCGAGCGATTTTTTCTTTACCTACCTATGCCGTTATTACTTCTGCTGTTATTCTAATGACTGTGATAGTGTCTCCTGTCATCAACGCCATCTACAAACCAAGAAAGAGATTTCAGCAAAACAAGCTAAAAACTATACAAAAATTAAGAGTTGATGCAGAGCTTCGAATTATAGCATGTGTCCACAATACTCGCCAAGCCACAGGCATGATCAACATCATTGAATCTTTTAATGCCACAAGACTTTCCCCTATACATGTTTCTGCCATGTACCTCATTGAACTTACTGGACGTGCTGCTGCACTTGTTGCTGCACATATGGAGAAGCCGAGTAGCCAACCCGGAGTACAAACTCTCACCAGATCACAAGCAGAGTTAGAAAGCATTGCCAATACCTTCGATGCATTTGGAGAGGCATATGACGCTATCAGAATCGAGACCTTAAATGTGGTGTCAGCCTATGCAACCATTCATGAGGACATATACCACTCAGCTAATGAGAAACGCACAAGCTTAATTCTCCTTCCATTCCACAAACATTTAAGTTCAGAAGGTGCGCTTGAAGTAACCAATGCTGTATACAAGGATGTAAACCAAAATGTAATGCAACATGCACCTTGCTCTGTGGGAATCTTTGTTGATCGTGATTTTGGGTCAATTCCCAAGAAGAACCTTCGTATTCTTATGCTTTTTGTTGGGGGCCCTGACGATCGTGAAGCCTTAGCTGTAGCATGGAGGATGGCAGGACATCCAGGAATCCGGCTATCAGTGGTCAGGATTCTGTTGTTTGATGAAGCGGCAGAAGTACATACTTCAATTCACAATGAAACGCAAGGGATATTGTCTGCTGTAATGGATAGTGAGAAGCAGAAAGAGTTAGATGATGAGTATATAAATTCATTTAGACTTACGGCAGTAAACAATGAGGATTCTATATCCTACTCAGAGATTGAAGTCCATACTGGTGAAGATATTCCCAAAGTTCTCAACGAGCTACAAAAAATTGGTTGTGATTTATACATAGTTGGACAGGGGAATTGTAGGAACACTCGGGTGTTCTCAAATTTGTTAGAATGGTGTGATTGCTCAGAACTTGGAGTTGTAGGGGATATTTTGGCGTCAAAGAATTTCGGTTCGCGCTCATCTTTACTAGTTGTTCAACAATATGGGTACGGAGGAATGGCATTTGCAAAGAATCTCAACCATGTGTCCACCAATATTCATGGCTTTGAGTCGCTTGTCGTGCACACAGAATAA 2448 0.4118 MADTIPACYEVSVLNPNRIWQTDNVLKTELPILAFQIAFAVVLSRFFFFIYKPLHQPRLISQISVGFLLTPPLLGRYTTIFEFIFPAKGVLNIEVLANIGLIYYAFLSGLEMNLNTILQVKKKAASIAIAGIIFPMVMAPGLYALHRKFYSSNDKNRLEESTSNAYLLWTLVLTVTGFPVLAHTLSELKLLYTGLGKAALTAAMISETYGWILFTLLVPFSITGKRAIYSVVSTTLFIVVCIYLVRPIILRYIDRKTDEEEWDDNQLLFVVMGFIACSCITDILGTHGIVGAFVYGLILPHGRFADLVMSISDDFAGGFLAPLFFGGTGMRLILTTIFYQAHWPLTLLVIVFLCVPKILSTLFATFVFGMQARDGLSLGLLLNTKGAMALIMLNNAWDRAIFSLPTYAVITSAVILMTVIVSPVINAIYKPRKRFQQNKLKTIQKLRVDAELRIIACVHNTRQATGMINIIESFNATRLSPIHVSAMYLIELTGRAAALVAAHMEKPSSQPGVQTLTRSQAELESIANTFDAFGEAYDAIRIETLNVVSAYATIHEDIYHSANEKRTSLILLPFHKHLSSEGALEVTNAVYKDVNQNVMQHAPCSVGIFVDRDFGSIPKKNLRILMLFVGGPDDREALAVAWRMAGHPGIRLSVVRILLFDEAAEVHTSIHNETQGILSAVMDSEKQKELDDEYINSFRLTAVNNEDSISYSEIEVHTGEDIPKVLNELQKIGCDLYIVGQGNCRNTRVFSNLLEWCDCSELGVVGDILASKNFGSRSSLLVVQQYGYGGMAFAKNLNHVSTNIHGFESLVVHTE 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02871 815 Pfam Sodium/hydrogen exchanger family 39 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca09g02871 815 Gene3D - 32 439 IPR038770 -
Cca09g02871 815 PANTHER CATION/H + ANTIPORTER 5 800 - -
Cca09g02871 815 PANTHER CATION/H+ EXCHANGER 3 5 800 - -
Cca09g02871 815 Gene3D - 481 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02871 Cca-Chr9 54321658 54324378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02871 8 813 Antiporter Super Family AT2G13620 37.973 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02871 - - gmx:100804266 1374.38