Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02859 ATGGCGGACACAAACACAAACTCAGTTGATGTGATTTTGGACTTTCTTCGGAGGAACCGATTCACCAGAGCTGAGGCAGCTTTGCGCAGTGAGATCAATAATCGCCCTGACTTAAATGGCTTCCTTCAGAAGCTTACCTTGGATGAAAAGGCCTCACGAGACGCCTCTCAAAATAATAAGGGGAAGCCTGTGCTAGGGATTCAAGGGGTGGAATCTAACGACACTCTTGATGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGTAATGGTCCAAATGCCGCTGAAAGCAAATGGAAAACTACTGCTCCCCCTATCGTGGAACGGAATAAATTGGATGAAGTGGTCGGGACAAGTGACAAGAACTTCATTTTCTCTAAGACTTCAGAGGATGGTATGCTTGATTTATATTCATGGAAGTTCAACCCCAGCAATGGTCTTGTCGATCCGTACCAAAACAATTTTGGTAGTAGGGCTAATAATACTCTGAGTTCGAAGGCCACTATACCTCAACAATCAAAATGTCAAACTAATGAAGCTGTTGATGTAGTTGCAGCCTATACCAATTCAAAGTCTGGGGAGGAAAATGCTGTGTTTGCTGAAAAAAAATCCTTGTGGCCTGGAAGTAGTAGTAAAGCTTCTGTGGATCTTAAGTATGGCCTTGCGCAAAACAAAGAGCCTATGGAAATTGATCGGCAGCTTAAATTCAGTAGTTCATCTCTTAAAAGGAACTTTGCAGATAACCCCTGGTCAAGGACAGATGAGAATGTGAATTCGTCTTCAGACTCGTGCAAAGATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGAGGATGTGTCTACAAGCTTTGATGGTACCACTTATTCTGACAAAAAAGAGGAGAAAAAAAGGGTTGAAGTTTGTGATACTAGGACATCATTAAAAGAGCAGGTGGATGAATTGGGGAGGGCTATTTACTTGGTCAAGACACAAGGCAGTTCTGAACAGAAGATGATTGGCAGCTTAACTTTTCCTCTTCCACCTGAAAATCAGAAGGAAGAGTTTCCCAGGCTTCCTCCGGTTAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAAATTCAAAACTCCCCGGTGCTGACAGCACATTGCTTATTGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAACCCTTCAGGTATTAGAAGGGCAACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGGTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCAAatgaatattgggactctgatgaatatgatgatgatgatgatgttgggtacatgaGACAACCTATTGAGGATGAGGCTTGGTTTTTGGCTCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCCGAGGAGGATTCTTATTTCTCTGGTGAGCGATATCTTCAGGCAAATAATGTTGAACCAGTCACAGCTACTGATGATCCTATTGGTCTAACAGTTTCTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTGATGTGTGCAGAACCGGTCTGGCGCGGCTTTGTTCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATGTGAGATCACGGCTAGAGGACGTCAGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGCAGTAGTGAAGGAGATTTAGAATATTTCTGTGATCGTGATGCTGGGCTTGGTAGTTCCAGGCACTCTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAACAAAGATAAGAACAATGACAAGAGTGAGTCAAATAAATATGTCATAGGATGTGATAATGATGCACAGTTGCAGAAGAAAACCCATGTTGATGTAAACTTCTCATTTCCCCTATCTTTGAAGGATGACCAGATGATTCAGGCTGCCACCAATAAGTCCTTGTGGTCAAATAATGGCAATGCAGATGAAACTGATGACTGTCTTAGTGCATTTATGGGAACTGATGACATGCTTGCTTCATGGAGGCGAAAGAGCAGCGATTCGTCACCTGTTAAAAGTTATAGGGATGACAATAATGCCAACATAGTAAGATCCACAAACTCTTCTCCGACAACACTCTCAAATTATGGATATTCTGAAAGAGAGCATGTGAAGATAGAAGAGGACGAAAAAGCTGGAATTGCAAGGGAAGATGATCTAGGAGCATCACTAGAGGACGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAAGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTACTAGCTGGAAGGTATCATGTTACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTTTCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGCGAACTGCTGAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGGGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTACATAGCCTTGGACTAATACACTGTGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAAACAGATCACCTGTGCTCTTATGTTCAGTCAAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGATGTATCTTGGCAGAACTTTGTACCGGAAATGTCCTCTTCCATAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGATCCAATTGATCAAAGTATGCTTGCAAAAGGACGGGACACGTATAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTAGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGCTTCATTGACTTTGTTGCTCACTTGCTTGAAGTCAACCCTAAGAAGAGGCCCTCTGCATCTGAGGCCCTGAAGCATCCATGGCTATCATACCCTTATGAACCCATATCATCTTGA 3573 0.4064 MADTNTNSVDVILDFLRRNRFTRAEAALRSEINNRPDLNGFLQKLTLDEKASRDASQNNKGKPVLGIQGVESNDTLDVSKELIVKEIECGNGPNAAESKWKTTAPPIVERNKLDEVVGTSDKNFIFSKTSEDGMLDLYSWKFNPSNGLVDPYQNNFGSRANNTLSSKATIPQQSKCQTNEAVDVVAAYTNSKSGEENAVFAEKKSLWPGSSSKASVDLKYGLAQNKEPMEIDRQLKFSSSSLKRNFADNPWSRTDENVNSSSDSCKDCSVKTVFPFSKEDVSTSFDGTTYSDKKEEKKRVEVCDTRTSLKEQVDELGRAIYLVKTQGSSEQKMIGSLTFPLPPENQKEEFPRLPPVKLKSDDKPLVVNWEEKFERDGPNSKLPGADSTLLIGSYLDVPIGQEINPSGIRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDPIGLTVSEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDVSMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFCDRDAGLGSSRHSHHDLDKKSTNKSNKDKNNDKSESNKYVIGCDNDAQLQKKTHVDVNFSFPLSLKDDQMIQAATNKSLWSNNGNADETDDCLSAFMGTDDMLASWRRKSSDSSPVKSYRDDNNANIVRSTNSSPTTLSNYGYSEREHVKIEEDEKAGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKFHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFHNDSPATLLARVIGIIDPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02859 1190 MobiDBLite consensus disorder prediction 662 692 - -
Cca09g02859 1190 ProSiteProfiles Protein kinase domain profile. 879 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02859 1190 Coils Coil 831 851 - -
Cca09g02859 1190 CDD PKc_DYRK_like 879 1181 - -
Cca09g02859 1190 SMART serkin_6 879 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02859 1190 MobiDBLite consensus disorder prediction 662 689 - -
Cca09g02859 1190 PANTHER DUAL SPECIFICITY PROTEIN KINASE 10 1188 - -
Cca09g02859 1190 Pfam Protein kinase domain 879 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02859 1190 Gene3D Transferase(Phosphotransferase) domain 1 933 1181 - -
Cca09g02859 1190 Gene3D Phosphorylase Kinase; domain 1 873 960 - -
Cca09g02859 1190 MobiDBLite consensus disorder prediction 483 516 - -
Cca09g02859 1190 SUPERFAMILY Protein kinase-like (PK-like) 868 1183 IPR011009 -
Cca09g02859 1190 PANTHER - 10 1188 - -
Cca09g02859 1190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1005 1017 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02859 Cca-Chr9 54216804 54226434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02859 878 1176 MAP Kinase Gene Family AT5G19010 31.034 8.02e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Cca09g02859 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02859 - - lang:109331412 1892.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02859 09 54216804 54226434 Cca09g02859 09 54216804 54226434 ECH
Cca09g02859 09 54216804 54226434 Cca08g00355 08 5344079 5352616 PCT