Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02846 ATGGATTCTCAACTACACCTTGATGCAAGCTATGACGAGGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCATTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACTGCACCTTTATATGTATTTGGGACAATGCAAGAGGGAGATCTTTTATCAGAGGAAGTCGTTTATGAACTCTTCTCCTTCATTTTCTGGACACTCACAATTATTTCTTTGATCAAGTATGCCTCTATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGTACTGTTGCTTTATACTCACTGTTGTGTAGAAATGCAAAAGTTGGCCTGCTCCCATGTGATAGTACCAACGAGGTTATGCTTTATGAGGAGAGAAGTTGCTCTAAGATGAAAACCGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTGATATTGTTTTTAGCCCTCTTTGGTTCCTGTATGACCATTGGGGACGCTGTGCTCACTCCAGCACTTTCAGTGTACTCTGCTTCGTCTGGCGTTCAGAGATCCTTGACAGACATATTGGATGACATATATGCCTCATCACCAAATACTCAGCAATCCGTAACAAAAGCTCTAAAAAGATATGTACCTGTTCCCTCCGCGTGTGTTATACTGGTTGGCCTGTTCATGCTGCAGAATTGCGGTACACGTAAAATTGGGATCATGTTTGCCCCAATCATCGCTGTTTGGCTATTGTTTGCTGCTGCGGTGGGAACATATAATATTTTCTACTGGGATGTAAAAATTATCTGTAAAATATCCCCAATCTACATATACAAATTCATCAAAAATATTGACCTCACCAGATGGAGGTTGTTAGGGAGCGTCATTTTGTGTGTAGCAGGATCGGAGGCAATGTTTGCAGACCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTGATCTATCCGCTTCTTCTTTTATGCTATGCTGGTCAGGCTGCATATATGTCCAAAAATTTAATTGCTCCGGAGTTTAATCATCTTAGTCAATCTATTCCACGTGGTTGCAGGCACTTGTTCATAGTATTATCCCTACTTTCTTCAGCCGTGGGAAGCcaagcaaccataacagcgtgtttctccatcattaaccagtgcctcgcattaaattgctttcccagaTCTCACTGTCGTGCTTGCTTTCAGAGACCTTGTGAAAATTGGCAATGCAACAGGTTTGGCTATCATTTGTGGAATGCTTGTGACAACTAG 1263 0.388 MDSQLHLDASYDEDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMQEGDLLSEEVVYELFSFIFWTLTIISLIKYASIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDSTNEVMLYEERSCSKMKTDSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASSGVQRSLTDILDDIYASSPNTQQSVTKALKRYVPVPSACVILVGLFMLQNCGTRKIGIMFAPIIAVWLLFAAAVGTYNIFYWDVKIICKISPIYIYKFIKNIDLTRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYMSKNLIAPEFNHLSQSIPRGCRHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRSHCRACFQRPCENWQCNRFGYHLWNACDN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02846 420 PANTHER POTASSIUM TRANSPORTER 15 392 - -
Cca09g02846 420 Pfam K+ potassium transporter 27 393 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g02846 420 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 392 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02846 Cca-Chr9 54079186 54081911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02846 8 391 Inorganic Solute Cotransporters AT1G70300 46.212 3.05e-114 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02846 K03549 K12236 gmx:100801073 675.626