Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02819 ATGCCTTCTCTTGTTGATCTGCAACGAATAACAACCCCAGATGATGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCCAATTTGTTGAAACTTGAACAAAAAGCCATGGAGATGGCAGCCAATTCAAGAAAGGATTTTGAAGTAAGTAATTTGGTACACAAGCTTGCAATGATTGTGGCAGACTATATGGGTGGATCAGTTGAAGATCCCGAAAGCATGTCAAGAGCATGGAGCAGTCTTAGTTACAGTCTAAAAGCAACCCTAGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATCCCATGCCGATTGGTGAAAGGACTGCAGTATATGGGTTCCGATGATGTGGCAATGAACTTTGTCAAAATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGCTCCTGGAACACTTATTCCATCTGATGCAACTGGATCACACATTGAGTGCGACGGATCTTCCCTTGCAGCCAGTCCTTCATCAAGAGAGCTTGATTTGTCTCGTATAGCATCGTTCAGCAGTGGGGTTGGAAGTTCATCTGAAGAAACTTCAGAGCCTGTGACTCTGGATAAGGAAAATAAATCAAAGCATTTTGCCTATGCAGGGAAAGAATCAATTGAATCAAAAAGTAACCCCTATGCAGAGAACATGACAGTGAAGGAATCCCTTAGCAGACCTAATTATCCTTATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCATGGGCAGTTAGATACCCCAACTGAACAAAAAGATGAAAACAAACAAGAAACTAAGGCTGATGACAATCTAGTTCCTGCACGATTTTTGCCTCCTTTGCCTCAGCAGCGAGTTCATCGCAAAGCAACTCCTATCAGTCAGCTGGAGCATTCTAAGCCTGTAGATGGCTTAGGAATTGGCCTTCCTTTTGATGCAGGAGAAGCTGCTGGACAGCACTTATCATCTCAGGCAGAAGCAACTCAGGTAAAGTATGGGAAAAATGTCCCAatccctgtaccaccagctgctactgctactgctgcagctgttgtagcaaccactgctgctgTCAATAAGCAGTATGAGCAGGGCCGTTGGAGTGATGGTGATGAGCCAAAGGGTAGTGGTGATGGAGAGCACAATGCTATAGGAGAAAACTCGGAAGGCGAGAGAAAATCTGATAGATCAGTAAGTAATGACAGCACAAAATCTGATGATGATGTTGCCGAGTATGATATTCCATGGGAGGAAATTGCGATGGGAGAGCGCATTGGACTTGGATCATATGGGGAAGTGTACCGTGGTGATTGGCATGGGACTGAAGTAGCCGTAAAGAAGTTTCTATATCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGAAGACTTAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGGCCTCCAAATCTGTCGATTGTTACTGAATTTCTTCCTAGGGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTGGATGAGCGAAGGCGGTTGCGGATGGCCCTTGATGCTGCTCGAGGGATGAACTATCTGCACAACTCCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGATAAAAACTGGGTTGTAAAGGTTTGCGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTATGGGGTCATACTATGGGAGCTCTGTACTTTGAGACAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGTCTTGACATTCCAGATGATGTAGACCCTGCCATTGCAGATATTATCAGACAGTGCTGGCAGACCGATCCAAAGTTGAGGCCTACATTTGCTGAAATCATGGCTGCTCTGAAGCCGTTGCAGAAGCCAATTACTGTTTCTCAAGTGCACAGACCAAGTGCTCAGTCATCCCGAGTTGCTGAAGACCCTGCAGGATAG 2307 0.4278 MPSLVDLQRITTPDDVTWEAVLVNRAADSNLLKLEQKAMEMAANSRKDFEVSNLVHKLAMIVADYMGGSVEDPESMSRAWSSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSDDVAMNFVKIDDGREYIVDLMAAPGTLIPSDATGSHIECDGSSLAASPSSRELDLSRIASFSSGVGSSSEETSEPVTLDKENKSKHFAYAGKESIESKSNPYAENMTVKESLSRPNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHGQLDTPTEQKDENKQETKADDNLVPARFLPPLPQQRVHRKATPISQLEHSKPVDGLGIGLPFDAGEAAGQHLSSQAEATQVKYGKNVPIPVPPAATATAAAVVATTAAVNKQYEQGRWSDGDEPKGSGDGEHNAIGENSEGERKSDRSVSNDSTKSDDDVAEYDIPWEEIAMGERIGLGSYGEVYRGDWHGTEVAVKKFLYQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELCTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAIADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITVSQVHRPSAQSSRVAEDPAG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02819 768 CDD STKc_MAP3K-like 494 740 - -
Cca09g02819 768 MobiDBLite consensus disorder prediction 434 479 - -
Cca09g02819 768 Pfam Ethylene-responsive protein kinase Le-CTR1 1 163 - -
Cca09g02819 768 Gene3D Phosphorylase Kinase; domain 1 481 565 - -
Cca09g02819 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Cca09g02819 768 SUPERFAMILY Protein kinase-like (PK-like) 477 739 IPR011009 -
Cca09g02819 768 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 758 - -
Cca09g02819 768 MobiDBLite consensus disorder prediction 321 345 - -
Cca09g02819 768 SMART serkin_6 488 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02819 768 MobiDBLite consensus disorder prediction 431 480 - -
Cca09g02819 768 Gene3D Transferase(Phosphotransferase) domain 1 567 751 - -
Cca09g02819 768 Pfam Protein tyrosine and serine/threonine kinase 489 740 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 758 - -
Cca09g02819 768 ProSiteProfiles Protein kinase domain profile. 488 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02819 768 PRINTS Tyrosine kinase catalytic domain signature 711 733 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 PRINTS Tyrosine kinase catalytic domain signature 601 619 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 PRINTS Tyrosine kinase catalytic domain signature 667 689 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 PRINTS Tyrosine kinase catalytic domain signature 562 575 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 PRINTS Tyrosine kinase catalytic domain signature 648 658 IPR001245 GO:0004672|GO:0006468
Cca09g02819 768 MobiDBLite consensus disorder prediction 322 339 - -
Cca09g02819 768 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02819 Cca-Chr9 53773379 53781889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02819 1 762 MAP Kinase Kinase Kinase AT1G73660 62.731 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Cca09g02819 PK_Tyr_Ser-Thr 8.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02819 - - ccaj:109799481 1473.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02819 09 53773379 53781889 Cca09g02819 09 53773379 53781889 ECH
Cca09g02819 09 53773379 53781889 Cca08g00295 08 4260449 4267420 PCT