Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02817 ATGGGTGGCAGAGGAACACTCGTGGAAGGGATTCGACGCTTGTTTCAACGACGCGCTTCTGTTGAAGACCACAACAACAATGCTAACAATAGCCGTGTCCATGTGAGAGATTTGCGCGCGCAATTGGCTTCCATTCCCAACCACGACCTCTCTGATTTCGATTTCTCTACCCTCAAGCCCATCAAAGTTCCCACACAAATCCCCTTCAAACCCTCTTCCATGGATCCCCACAAAAAGGGTGCCCCAGAGACAGAGTTTTTTACTGAGTATGGAGAGGCAAGTCAATACCAGATCCAAGAGGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCAGTTGATGCTCATACTGGAGAAAGGGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCAGACGCCACGCGGATCCTTAGAGAAATCAAGCTCTTGCGGTTGCTTCGACATCCTGATATTGTGGAAATTAAGCATATTATGCTTCCTCCTTCGCGGAGAGAGTTCAGGGATATCTATGTTGTCTTTGAGTTGATGGAATCTGACCTCTATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTCAGGGGTCTGAAATATATTCATACAGCAAACGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTAGAGTTTCATTTAATGATGCCCCATCAGCTATATTCTGGACTGATTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTTTGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTTGTACACCAATTGGATCTCATGACTGATTTGCTTGGCACTCCCCCTCCTGAGTCCATTGCGAGGATTCGAAATGAAAAAGCTAAAAGGTATCTTAGTAGCATGAGAAAAAAGCAACAGGTTCCATTCTCCCAAAAATTTCCAAATGCAGATCCATTAGGTCTTCGTTTGCTGGAGCGCCTACTTGCATTTGATCCTAAAGACCGTCCAACAGCTGAAGAGGCTTTAGCTGATCCTTACTTCAATGGTTTGGCGAACGTGGACCGTGAACCATCCACTCAACCTATTTCAAAACTTGAGTTCGAATTTGAGAGAAGGAAATTGACCAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCTCAAATGCTCCAGGAATATCTTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTGGATCGGTTTAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCATTGCAGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTTGTGCTCCCAAGAATGAAAGTAATCAAAACAACGATTCTGAAATGCCGAGTGGTGCAAATCTTCATAGTCCTCCTGGATCTGATGCGACAGGTGCTCAAAATGGAACCCCCAAACGTAGCTTGATGAAGAGTGCCAGTATTAGTGCTTCCAAGTGTATAGTTGTGAAACAAAATAAAGATAAAGAGGACGAGCCAATTAGGGAGGTAAATGATGAGGCAGTGGATGAAGTGATGGATGAGGTTACTGCCCTCCATGTTTGA 1725 0.433 MGGRGTLVEGIRRLFQRRASVEDHNNNANNSRVHVRDLRAQLASIPNHDLSDFDFSTLKPIKVPTQIPFKPSSMDPHKKGAPETEFFTEYGEASQYQIQEVVGKGSYGVVGSAVDAHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLYQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKAKRYLSSMRKKQQVPFSQKFPNADPLGLRLLERLLAFDPKDRPTAEEALADPYFNGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKNESNQNNDSEMPSGANLHSPPGSDATGAQNGTPKRSLMKSASISASKCIVVKQNKDKEDEPIREVNDEAVDEVMDEVTALHV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02817 574 Gene3D Phosphorylase Kinase; domain 1 112 433 - -
Cca09g02817 574 CDD STKc_TDY_MAPK 95 432 - -
Cca09g02817 574 ProSiteProfiles Protein kinase domain profile. 96 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02817 574 Pfam Protein kinase domain 96 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02817 574 MobiDBLite consensus disorder prediction 491 535 - -
Cca09g02817 574 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 60 516 - -
Cca09g02817 574 SMART serkin_6 96 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02817 574 ProSitePatterns Protein kinases ATP-binding region signature. 102 126 IPR017441 GO:0005524
Cca09g02817 574 SUPERFAMILY Protein kinase-like (PK-like) 92 392 IPR011009 -
Cca09g02817 574 MobiDBLite consensus disorder prediction 466 535 - -
Cca09g02817 574 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 60 516 - -
Cca09g02817 574 ProSitePatterns MAP kinase signature. 131 234 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca09g02817 574 Gene3D Transferase(Phosphotransferase) domain 1 182 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02817 Cca-Chr9 53742068 53746768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02817 1 573 MAP Kinase Gene Family AT1G73670 72.496 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca09g02817 Pkinase 6.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02817 - - gmx:100780831 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02817 09 53742068 53746768 Cca09g02817 09 53742068 53746768 ECH