Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02785 ATGTCGAAGGTCTTAGTCACAATTAGTGTATTCTTGATGATCATGACAGAAATGGGCACAGTGCTTGTGCAGAGTGAAAAAGAAAATGGTGTTGATAGCATTTTAGACGGAAAGAAAACAGTGCGTGTTAAAAATGATTTGAATAATGGTATTGTTATGTATCTCCATTGTCGATCGAAGGATGATGATCTTGGTCAACATGTTCTTGCTGTTGGAAAAGACCAAGAATGGTCCTTTCGAGACAACATTGGTGATACCACTCTTTTCTGGTGCACGTTGGATGCAGCAAGTTGGGAATTCAAGTTTGAAATTTACAGTGCCAAAAGGGATACAAAGTGTACTTCCCAATGTAACCGAAGTATCAGATCTGATGGAGCTTATTTTTGGAATCAGCTTGATCAAGTCTGGGAGAAGAGATTCTCATGGAACATACATCTCTAA 441 0.3878 MSKVLVTISVFLMIMTEMGTVLVQSEKENGVDSILDGKKTVRVKNDLNNGIVMYLHCRSKDDDLGQHVLAVGKDQEWSFRDNIGDTTLFWCTLDAASWEFKFEIYSAKRDTKCTSQCNRSIRSDGAYFWNQLDQVWEKRFSWNIHL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02785 146 PANTHER - 28 129 IPR010264 -
Cca09g02785 146 PANTHER PUMILIO HOMOLOG 15-LIKE 28 129 - -
Cca09g02785 146 Pfam Plant self-incompatibility protein S1 40 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02785 Cca-Chr9 53492214 53492680 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02785 23 143 Carbohydrate Esterase AT3G16970 28.800 8.93e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02785 - - ccaj:109803329 174.481