Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02782 ATGTGGAAGGTCTTAGTCACAATTAGTGTATTGTTGATGATTATGACAGACATGGTGATAGTCCCTGTGCAGAGTGAAGAAGAAAATGGTGTTGAAAATGGTTATGTGGATGGGCTTATAGGTAAAAGGAAAACTGTGCTCGTGAAAAATGATATAGATAGTGGGGTTACGGTTAATCTCCATTGTCGATCAAAGGATGATGATCTTGGCCTACATGTTCTTAGACTTGGAGAGCAGCAAGTATGGTCCTTCCGAGATAACATTTTTCGTACCACTCTTTTTTGGTGCACCATGGATGCAAAAAATAAGGAATACCAGTTTGAAATTTATAGGGCTAAAACGGATCGTACATGTACTTCTCAATGTTTTCGAAGTTTGAGAGAAGATGGAGCCTATTTTTGGAATCAGCCCCTACAACTCTGGGAGAAGAGAATCTCATGGTCCATTCAATGA 453 0.3951 MWKVLVTISVLLMIMTDMVIVPVQSEEENGVENGYVDGLIGKRKTVLVKNDIDSGVTVNLHCRSKDDDLGLHVLRLGEQQVWSFRDNIFRTTLFWCTMDAKNKEYQFEIYRAKTDRTCTSQCFRSLREDGAYFWNQPLQLWEKRISWSIQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02782 150 PANTHER - 40 134 IPR010264 -
Cca09g02782 150 Pfam Plant self-incompatibility protein S1 45 147 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02782 Cca-Chr9 53474060 53474665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02782 19 150 Carbohydrate Esterase AT3G16970 25.735 5.14e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02782 - - ccaj:109803329 281.952