Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02771 ATGGCGCAGGTGCCAGCAATCGAGCAAGTCCAGTGCTTCGGCCGGAAGAAGACGGCGGTGGCCGTCACCTACTGCAAGCGCGGCCGAGGCCTCATCAAGATCAACGGCTGTCCGATCGAGCTCGTGGAGCCGGAGATCCTCCGCTTCAAGGCCTTCGAGCCAATCCTCCTCCTAGGCCGCCACCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGCGGTCACACCTCCCAGATCTACGCCATCCGCCAGAGCATCGCCAAGGCACTCGTCGCCTTCTACCAGAAGTACGTCGATGAACAGAGCAAGAAGGAGATTAAGGACATTCTCGTCAGGTATGATCGTACTCTCCTCGTCGCCGATCCCCGCCGCTGCGAGCCAAAGAAGTTCGGAGGTCGCGGTGCTCGCGCCAGGTTCCAGAAATCCTACCGTTGA 441 0.6168 MAQVPAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02771 146 PANTHER RIBOSOMAL PROTEIN S9 5 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Cca09g02771 146 PANTHER - 5 146 - -
Cca09g02771 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Cca09g02771 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
Cca09g02771 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Cca09g02771 146 Gene3D - 3 146 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02771 Cca-Chr9 53330693 53331721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02771 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.356 2.25e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02771 K02960 - mnt:21410120 283.878