Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02753 ATGAGTAATGGCCAAATTCTCTCTGAGGCTTCTCAATTCTCAGGTCTTAGGGTTCTTGCAATTGGTCATGACCCCACGGTTATTGAATTCATTAAGCAAATATGTAGTCCACTCCAATATCAAGTTGTCACATGCACTAAATCTCCATTTGCTTTGAATCTTGCGATGGAAAGAAAAGGTTGCACTGATGTGATACTCATGGAGCTTCACATGCTAAATATGGATGGCCATGAATTCCTTCAGCATGTCAAGAAGGAAATTTCTGTTATTAGTGTGTAA 279 0.3907 MSNGQILSEASQFSGLRVLAIGHDPTVIEFIKQICSPLQYQVVTCTKSPFALNLAMERKGCTDVILMELHMLNMDGHEFLQHVKKEISVISV 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02753 92 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 89 IPR045279 GO:0009736
Cca09g02753 92 SUPERFAMILY CheY-like 12 85 IPR011006 -
Cca09g02753 92 Gene3D - 6 92 - -
Cca09g02753 92 Pfam Response regulator receiver domain 18 89 IPR001789 GO:0000160
Cca09g02753 92 ProSiteProfiles Response regulatory domain profile. 17 92 IPR001789 GO:0000160
Cca09g02753 92 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 13 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02753 Cca-Chr9 53208743 53209119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02753 14 89 Response Regulator Gene Family AT4G16110 31.579 2.71e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca09g02753 Response_reg 8.1e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02753 - K04257 ccaj:109803337 136.346