Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02701 ATGTCTCCATGGAAATCTGAAGTTCCCATAGTGATGAATTCTGCATCTTATGACATTTCAGAACCCAGTGACTTGGACAGCCCAAATGCTAGTTCCAATGGAAATGGGAGTTTTCTGACCTTTTATGGTGAGGTGGAAGCCAAACATCGATTGCTTTTGGTTCACTGGTTAACTAGTCTTGTTCCTTCATTGTACTTCCCAATAAATGTCACGGATGGTGAATTAAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTGAACAAGCTAAGACCTGGTACCGTGAATGTGGTTAGTGAACCTGATAATTCTCTGCCATCACAATCAGAAAATGTTAAATCGTTTCTGAAAGCTATGGACGGAATGGGAGTACCCCGGTTTGAAATATCAGACCTAGAGAAGGGGTCTATGAAAGCTGTTGTGGATTGTCTTTTAACACTCAGAGCAAAAAGTTTGCGGAATGCTTTGGGAGATAATATTTCTGTAACTAATTCCAACACGGTGAGCCCTCGTGTAAATATACCACCCAATTTTCATCATTCTCCATCATTTAGTGGAGACCAGAAGAAGAGTTTAGCTGGGTCAAAGTTGCAACGTGTTATGAGTACCCCAGTTATGGCGGAATCACCAGCTTCATTGATACACCATGTTGGTCATAAGTTCCATGAGGTGTTTCAACTGAAACCTGGGAGTTACGCAGATCTTCCTGCTGCAAAAATATCAGAAATGATGACGTCAGACAGTTTAGATACTGCACCGACTCAATCGCTTCTGACCGTGGTGAATGGTATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATCGCGTGGCTTGCTTATTGAAAAAGGTTACTCAAGAGCTTGAGCGTCGCATGTCAACTCAAGCAGAACATTTACGAACTCAAAACAATCTTTTTAAGGCTCGAGAAGAAAAATACCAATCGAGAATACGAGTACTCGAGGCACTTGCATCTGGAACTAAAGATGGAAGTGAGGTATTTCCTACCAAGTTTCAGCAGTTTAAGGTTAAGAAGATCAAAGAGGAACAAAAAAAGTTAGATGAAAATGCAGTTATTAGGTTGATAAAAGAGCAGGAGAACAAAAATTTGGAAATTTCAGCCTTCAAGATAGAACTGGAAACAGCCAAAAGAACATATGGACTACAATTCTCACAGTTGGAAGAAGAAACTAAATGTGCTAAAGAAGAATTTACACTGAAAGCCCAAGAACATGAGCATCAATTGCAAGAATTAAGAAATAAGCCCTTTGGCCATTCAATACAGGTAGAAGAGATCAAAGGACAAGTAAAAACAACAGATGAAGAGGACAAAAATTTGGAAATTTCAGCATTAAAGCATGAACTGGAAACAACCAAGAAAACATATGAAGAAAGATGTTCACTGTTGGAAGAAGAATATGAGCATCGATTGGAAGAATACGAGCATCGTTTGGAAGAATTTAGAAATGAGGCTGagaggatcgaagaggaaagaaagaaggcagatgaaagagaaaTCAATAGGTTGATGAAAGAGCATGAGGACAACAAATTTGAAATTTCATCATTGAAGGAAGAACTGGAAACAACTAAAGAAACATATGAAGTTAAGTGCTCACAGTTGGAAGAATTAAAAAATAAGGTTAAGGAGCTTGAGGTTTCTTCTGAATCAAAATATCAGAAGTGGAAAATGAAAATGAACCAATTGCAGACTGTTGTAGAATTTCAATTCAGTTCCCTACAGAGAATGAAATTATCTTGGGAATCGATGAAGCAAAGTGTTGTGAAAGAGCAAACGGCTTATGCAGAGGAGTGGGAACGATTAGGTGCAAATCTTAAACCAATGGCACTGGCAGCTGCGAACTACCATGCTCTTCTTGCTGAAAACAAAAAGCTATTTAACGAGATTCAAGAATTAAAAGGAAATATCAGAGTATATTGTCGAGTTAGACCATTTCTTTCAGAAAAGAAGGAAAAACAGTCTATTGTTGAACACATTGGTGAAAATGATTTGGTTGTGGCAAATCCATCCAAAGAAGGAAAAGATGCTCTTCGGTCATTTAAGTTTAACAGGGTTTTTGGCCATGCCACAACTCAAGCGGAGGTATACTCTGATATCCAATCTTTAATAAGATCAGTTTTAGATGGGTATAATGTGTGTATATGTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCGAATGGGGCAACAAGCGAGACTATTGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAGGATTTCCACAAGTAGACAAAGCTTCGTAGAGTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTGCGTGACTTGTTAGCAACAGATGGTTCTCCCAAAAAACTTGGGATATTGAATCAATCGCTACCAAATGGCTTAGCAGTACCAGATGCTAGCTTGTTCCCTGTGAAAACACCTCCAGATGTGTTGAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGAAGGATTCGAAGACTGGTTCTACTATGGTTGGTAATCTTCATTTGGTAGATTTGGCCGGAAGTGAAAGGGTAGATCGGTCTGAAGTAATTGGGGATAGGCTTAAGGAAGCACAGCATATAAACAAATCACTAGCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGTCCTCATGTACCTTACAGAAACAGCAAGCTTACTCAACTTCTACAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTTTCCAGATTAATTCAGACGTTAGTTCATATTCTGAAACTCTCAGCACTTTAAAGTTTGCTGAGAGGGTTGCTGGAATTGAATTAGGAGCTGCACGAAGTAGCAAAGAGGGCAAAGATGTCAGAGAATTAATGGAACAGGTGTCTTCTTTGAAGAGCGCTCTTTTGGCAAAAGATGAGGATATTGAAAGGCTTCAATTACTCAAAGGTAGCAATCGTAAGCGAAACCTGATTCCACGAAGTGGAAGTAGTAAGCACTTCGATGATCATATGCACCAAAATGATTTTTCCCATCAATATGAACTTTCTGGGGGAGAGATAGGAAAACATATTGCAGAAACTTCGGGATTCACAGATTCTGATTTTGATGGAAGATCGAGTGATCTTTCGGACAGTGGTATTGCTCCAGGCACGGAAACTGATGGCTCTGAAAATTCAAGTATCACTGGAGGCACAAAATCATCAGAGAAGATGGAGAGCAGATCTAAAGCTATTCGCAGAACCGTTCAAGCGATGAGGAAATTAGGCCTAGCGCCATCTATCACTGGCAGCCAACTGAAGGACCCCATGAAGAAGCCATCAGGTATGAAAAAAAGCGTCAGTATAGGCAGCCTTAGACCTCAAAAACTATGGAAGTAA 3480 0.3931 MSPWKSEVPIVMNSASYDISEPSDLDSPNASSNGNGSFLTFYGEVEAKHRLLLVHWLTSLVPSLYFPINVTDGELRACLSNGTVLCQILNKLRPGTVNVVSEPDNSLPSQSENVKSFLKAMDGMGVPRFEISDLEKGSMKAVVDCLLTLRAKSLRNALGDNISVTNSNTVSPRVNIPPNFHHSPSFSGDQKKSLAGSKLQRVMSTPVMAESPASLIHHVGHKFHEVFQLKPGSYADLPAAKISEMMTSDSLDTAPTQSLLTVVNGILEESVERRNGEIPHRVACLLKKVTQELERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLEALASGTKDGSEVFPTKFQQFKVKKIKEEQKKLDENAVIRLIKEQENKNLEISAFKIELETAKRTYGLQFSQLEEETKCAKEEFTLKAQEHEHQLQELRNKPFGHSIQVEEIKGQVKTTDEEDKNLEISALKHELETTKKTYEERCSLLEEEYEHRLEEYEHRLEEFRNEAERIEEERKKADEREINRLMKEHEDNKFEISSLKEELETTKETYEVKCSQLEELKNKVKELEVSSESKYQKWKMKMNQLQTVVEFQFSSLQRMKLSWESMKQSVVKEQTAYAEEWERLGANLKPMALAAANYHALLAENKKLFNEIQELKGNIRVYCRVRPFLSEKKEKQSIVEHIGENDLVVANPSKEGKDALRSFKFNRVFGHATTQAEVYSDIQSLIRSVLDGYNVCICAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFRISTSRQSFVEYEIGVQMVEIYNEQVRDLLATDGSPKKLGILNQSLPNGLAVPDASLFPVKTPPDVLKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKDSKTGSTMVGNLHLVDLAGSERVDRSEVIGDRLKEAQHINKSLAALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFFQINSDVSSYSETLSTLKFAERVAGIELGAARSSKEGKDVRELMEQVSSLKSALLAKDEDIERLQLLKGSNRKRNLIPRSGSSKHFDDHMHQNDFSHQYELSGGEIGKHIAETSGFTDSDFDGRSSDLSDSGIAPGTETDGSENSSITGGTKSSEKMESRSKAIRRTVQAMRKLGLAPSITGSQLKDPMKKPSGMKKSVSIGSLRPQKLWK 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02701 1159 Gene3D - 507 547 - -
Cca09g02701 1159 Gene3D - 360 399 - -
Cca09g02701 1159 Gene3D - 433 475 - -
Cca09g02701 1159 PANTHER KINESIN-LIKE PROTEIN KLP-3 16 361 - -
Cca09g02701 1159 PANTHER KINESIN-LIKE PROTEIN KLP-3 370 426 - -
Cca09g02701 1159 PANTHER KINESIN-LIKE PROTEIN KLP-3 444 1159 - -
Cca09g02701 1159 MobiDBLite consensus disorder prediction 1078 1102 - -
Cca09g02701 1159 PRINTS Kinesin heavy chain signature 721 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 PRINTS Kinesin heavy chain signature 844 861 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 PRINTS Kinesin heavy chain signature 875 893 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 PRINTS Kinesin heavy chain signature 924 945 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 SMART ch_5 49 152 IPR001715 GO:0005515
Cca09g02701 1159 SUPERFAMILY Calponin-homology domain, CH-domain 49 153 IPR036872 -
Cca09g02701 1159 Coils Coil 406 426 - -
Cca09g02701 1159 ProSiteProfiles Calponin homology (CH) domain profile. 47 154 IPR001715 GO:0005515
Cca09g02701 1159 CDD CH 46 154 IPR001715 GO:0005515
Cca09g02701 1159 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 16 361 - -
Cca09g02701 1159 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 444 1159 - -
Cca09g02701 1159 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 370 426 - -
Cca09g02701 1159 Pfam Calponin homology (CH) domain 53 151 IPR001715 GO:0005515
Cca09g02701 1159 Gene3D Kinesin motor domain 587 976 IPR036961 -
Cca09g02701 1159 Coils Coil 457 566 - -
Cca09g02701 1159 ProSiteProfiles Kinesin motor domain profile. 647 974 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 647 1011 IPR027417 -
Cca09g02701 1159 Coils Coil 627 647 - -
Cca09g02701 1159 Pfam Kinesin motor domain 653 972 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 Gene3D - 42 154 IPR036872 -
Cca09g02701 1159 SMART kinesin_4 645 982 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02701 1159 MobiDBLite consensus disorder prediction 1061 1159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02701 Cca-Chr9 52681243 52689063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02701 337 974 Calmodulin-binding Proteins AT5G65930 31.908 3.08e-68 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02701 K10406 - aprc:113855795 1470.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02701 09 52681243 52689063 Cca09g02701 09 52681243 52689063 ECH
Cca09g02701 09 52681243 52689063 Cca08g00225 08 3148657 3151950 PCT