Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02695 ATGAGTCTTTCAATCCCCATTGTAATACTTTCAGCCTTGGTATTCATTTTGTCTACCATCTTTGTGGGTAGAAAAGTGAGGAAAGATGAGCATAGACGCCCCCCAGGTCCACCGACCATTCCAGTAATCGGTAACCTGCACATGTTGGGAAAACTCCCACACCGCAGCCTGGAAGCCTTAGCCAAAAAATATGGACCCATCATGTCCCTGAAGCTAGGGCAAGTTCCAACCATTGTGGTCTCATCCGCAGAGGCTGTAGAGCGATTCCTGAAGACACACGACGCCGTTTTCTCTAATCGTCCCACACTTGAAGCCACTAACAGCTTTAGCTACAGGTCCAAGGGGTTAGCATTCTCCAAATACGGTGCGTACTGGCGTGACATGAGGAAAGTGTGCACCTTACAGCTTCTGAGCGCGTCCAAGGCTGAGTCCTTTGCGCCTTTGAGGAAGAAAGAGTTGGAACAAGCGCTGAAGTTGCTAGAGAAAGCCGCAATGAATGGCGAGGTCGTCGACCTTAGCGAGGTGGTGCACAACGTTGTTGAAGATTTTGTGTACAAAATGGTGTTGGGGCGCAGCAAGGATGCTGACTTTGATTTGAAAGGGTTGATTCAAAATGAGCATCAACTTCTTGGCGCGTTTAATCTAGCGGATTATGTGCCTTGCCTCGGAGCTCTCGATCTTCAGGGATTAAAACGAAGGTTCAAGAAAATTAGTGAAGCACTTGACCAAATGTTGGAGAAGATAATTAAGGAGCATGAACACGGTTCAGATGTACAACATGGACGAAACCACAAGGACTTCATAGACATATTACTCTCACTAAGGCAGAAGCCTATCGATCCGGATGATGAACAAAACCATGTCATTGATCGAACAAACATTAAGGCAATACTCTTGGATATGATTAGTGGGTCATTTGAAACTTCTGCAATTACTGTGGAATGGGCATTATCCGAGCTTCTAAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATGTGATTGGAAGGAACAAATTGGTGGGGGAAAATGATTTAGCAAAGTTAAGTTACTTGGATATGGTTATCAAAGAGACCATGAGATTATATCCTACGATACCATTAAACTACAGAGAGTCGATTAAGGATTCTACGATTCATGGCTATTTCATTGAGAAAAACTCAAGAATCTTTATAAATTTATGGGCAATAGGAAGAGATTCTAAAATATGGTCTGATAATGCTGAAGTATTTTATCCAGAAAGATTCATGGAAAACAATTTAGACTATCGAGGACATAACTCTCAATTTATTCCATTTGGTTTTGGTCGTAGAGGATGTCCTGGATTGCACTTAGGTTTAATTACAGTGAAACTTATTGTCGCTCAACTAGTGCATTGCTTTAGCTGGCAACTTTCAGGAAGTATAGCCCCAAATGACTTGGACATGACGGAAAAAGATGGCCTCTTGATGCCGAAAGCCATGCACTTGCTTGTTGTGCCAAGGTACCGTCTTCTCAGAGAAGCTCACAGTGAACCAACAAATTGA 1536 0.4297 MSLSIPIVILSALVFILSTIFVGRKVRKDEHRRPPGPPTIPVIGNLHMLGKLPHRSLEALAKKYGPIMSLKLGQVPTIVVSSAEAVERFLKTHDAVFSNRPTLEATNSFSYRSKGLAFSKYGAYWRDMRKVCTLQLLSASKAESFAPLRKKELEQALKLLEKAAMNGEVVDLSEVVHNVVEDFVYKMVLGRSKDADFDLKGLIQNEHQLLGAFNLADYVPCLGALDLQGLKRRFKKISEALDQMLEKIIKEHEHGSDVQHGRNHKDFIDILLSLRQKPIDPDDEQNHVIDRTNIKAILLDMISGSFETSAITVEWALSELLRHPRVMKKLQDELDNVIGRNKLVGENDLAKLSYLDMVIKETMRLYPTIPLNYRESIKDSTIHGYFIEKNSRIFINLWAIGRDSKIWSDNAEVFYPERFMENNLDYRGHNSQFIPFGFGRRGCPGLHLGLITVKLIVAQLVHCFSWQLSGSIAPNDLDMTEKDGLLMPKAMHLLVVPRYRLLREAHSEPTN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02695 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 501 - -
Cca09g02695 511 Pfam Cytochrome P450 34 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 501 - -
Cca09g02695 511 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02695 511 Coils Coil 227 247 - -
Cca09g02695 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cca09g02695 511 Gene3D Cytochrome P450 25 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02695 Cca-Chr9 52596886 52599786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02695 8 501 Cytochrome P450 AT5G07990 39.130 1.11e-121 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02695 - - gmx:100814172 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02695 09 52596886 52599786 Cca09g02695 09 52596886 52599786 ECH
Cca09g02695 09 52596886 52599786 Cca08g00202 08 2815145 2826011 PCT
Cca08g00207 08 2889682 2892436 Cca09g02695 09 52596886 52599786 PCT