Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02668 ATGTTCCGCTCCTCATTCGGTTCCTGCAGAACCCGTAACCTAACCGATGTGATGGAAAAAGCGGTTTTTGCACCACCCAACCCGGTGGAACCAACCTCCCCCAAAACAACAAGCAACGACACTTGCATCGTGTCGTTTAAGGATTCCCACTCTCTCCCCAGACGCAAAATCTCGGAATGGCCATCACCTTTTCTATGGGCTGCTACCACCAATCACAACCTTAACCTTAACCTCAACCTCGGTGTCATGTCGTGCCCCCCCACTTCCCCCAACATTTCCCTCAACACAATCCACGAACACGATTTCGGCTTCGACGACAAAACAAAGGCTTTTTCAACGATGACCAAAACCaagaagaagaagaagaagaagaagaagaagaagaagaagaGACGTGCCCAGAAGAGAAGGGACTTTTTCCCTTTCAATTCTTGCGCCAAAGACACAAACTTTGGTGGCTACTGGTGGTACAGCACCGACGAAGACGACGAAACCGACACCCTCTTCTCCTCCCGGAGCCTCTCCTCCGACTCCTCCCGCTCCCACCGTCGCCGCCGGAAAACTGACCGGAGCTCCGACATGGGTCTTCTGCCGCTGCACGGAAAGGTCAAGGACACCTTCGCGGTGGTGAAACGCTCCAGCGACCCTTACAGCGATTTCAGGACTTCCATGCTGGAAATGATCGTGGAGAAGCAGATTTTTTCGCCCGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTCTCTCTGAATTCGTATCACCATCATAAGATCATTGTCCAAGTCTTCACCGAGATTTGGGAGGCCCTCTTCTCTGACTGGTTTTGA 825 0.497 MFRSSFGSCRTRNLTDVMEKAVFAPPNPVEPTSPKTTSNDTCIVSFKDSHSLPRRKISEWPSPFLWAATTNHNLNLNLNLGVMSCPPTSPNISLNTIHEHDFGFDDKTKAFSTMTKTKKKKKKKKKKKKKRRAQKRRDFFPFNSCAKDTNFGGYWWYSTDEDDETDTLFSSRSLSSDSSRSHRRRRKTDRSSDMGLLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02668 274 MobiDBLite consensus disorder prediction 169 194 - -
Cca09g02668 274 ProSiteProfiles OVATE domain profile. 209 268 IPR006458 -
Cca09g02668 274 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 207 270 IPR006458 -
Cca09g02668 274 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 272 IPR038933 GO:0045892
Cca09g02668 274 Pfam Transcriptional repressor, ovate 213 270 IPR006458 -
Cca09g02668 274 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 1 272 - -
Cca09g02668 274 MobiDBLite consensus disorder prediction 114 134 - -
Cca09g02668 274 Coils Coil 116 138 - -
Cca09g02668 274 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02668 Cca-Chr9 52275997 52276821 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca09g02668 Ovate 2.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02668 - - gmx:100776613 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02668 09 52275997 52276821 Cca09g02668 09 52275997 52276821 ECH