Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02644 ATGGTGCAAAGCAAATTGAGAAGTTACGACTCACTCCCTTTGTTATCCACAAACAACACAAGGAAAAGAAAAGAAAGCCAAATGGTGAGAGTGGTTCCCATGGCTTCTTCGATTCGACCCACTCTCTCCTCCCTTAGGTTCTCACCACCGCTttcttcttcttcttctcgtctctctttcttcCACCTCCCCTCTCTGTCTCAATCCCATAGTTTTGGCCTGAAAGCTTCCAGAGTGATGAGACAGGATGGTAACTCCGCCAGAGTCATGGCATCGGGGAACGTGCCTCAGTCAGTTGCAGCTGCTTCACCAGAAAATGTGCTCGAGTGGGTCAAACAGGACAACCGGAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAGGACCATCAAGTTTTATACAGAGTGCCTAGGAATGAAGCTCCTCAGGAAGCGGGACATACCAGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCCGAAGACTCGCACTTTGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATGTTGCAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACCAGAGAGCCTGGTCCTGTAAAGGGAGGGCGTTCAGTAATAGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTATAGAAAGAGGTCCCACTCCTGAACCTTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTAAACCGATCCATAGAATTTTATGAGAAGGCATTTGGTATGGAGCTGCTTCGTACACGAGATAATCCAGAGTACAAGTATACCATAGCAATGCTGGGTTATGGGCCAGAAGATAAAAGTACTGTTTTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGTAATTAAACTAGCTGGAGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1143 0.4252 MVQSKLRSYDSLPLLSTNNTRKRKESQMVRVVPMASSIRPTLSSLRFSPPLSSSSSRLSFFHLPSLSQSHSFGLKASRVMRQDGNSARVMASGNVPQSVAAASPENVLEWVKQDNRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEVIKLAGGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02644 380 ProSitePatterns Glyoxalase I signature 1. 120 141 IPR018146 GO:0004462|GO:0046872
Cca09g02644 380 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 247 372 IPR037523 -
Cca09g02644 380 TIGRFAM glyox_I: lactoylglutathione lyase 105 250 IPR004361 GO:0004462|GO:0046872
Cca09g02644 380 TIGRFAM glyox_I: lactoylglutathione lyase 248 372 IPR004361 GO:0004462|GO:0046872
Cca09g02644 380 Gene3D - 244 380 IPR029068 -
Cca09g02644 380 PANTHER LACTOYLGLUTATHIONE LYASE 44 380 - -
Cca09g02644 380 ProSitePatterns Glyoxalase I signature 2. 184 196 IPR018146 GO:0004462|GO:0046872
Cca09g02644 380 CDD GlxI_Ni 118 239 - -
Cca09g02644 380 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 118 238 IPR004360 -
Cca09g02644 380 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 250 366 IPR004360 -
Cca09g02644 380 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 248 370 IPR029068 -
Cca09g02644 380 Gene3D - 90 242 IPR029068 -
Cca09g02644 380 ProSitePatterns Glyoxalase I signature 1. 250 271 IPR018146 GO:0004462|GO:0046872
Cca09g02644 380 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 44 380 - -
Cca09g02644 380 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 117 241 IPR037523 -
Cca09g02644 380 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 116 246 IPR029068 -
Cca09g02644 380 MobiDBLite consensus disorder prediction 1 27 - -
Cca09g02644 380 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02644 Cca-Chr9 52042348 52047793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02644 250 369 Calmodulin-binding Proteins AT1G08110 28.082 1.96e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02644 09 52042348 52047793 Cca09g02644 09 52042348 52047793 ECH
Cca09g02644 09 52042348 52047793 Cca08g00110 08 1543314 1547363 PCT