Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02639 ATGAACTTATGTCACATGAGAAACCGGAAATTGCTTTTTCTGTTGGCGGTACTTGCTGCTAATTATTTACTATTTCAGTCAATATTGGTTCCATATGGAAATGGAAATGCCCCATGGTCTTCGGTGCCCCAAAACCAAAAGCATGACAAAGTTAGCTTTCCATCATTACATTCAACTCCAAAGTACTCCACCATTTGGAATCCACCAACAGGTTCTCCTGCTGTCATTGCTACGGTGGAAAAAGTGCACATTCCTATTGTTCAAGATGAAGTTGGGCTCGGTGAGAAAAAGGGAATGCGCAATGATGAAAAGGGTGGTTTAGTCTCCGAAAGAAACAACTCTAATAATGATGTTTTTGAACTCGGGGCTGATAGAAATGATGTTCGCAGTTTAGCTGGGAAGAAAGATGTCAGAAAAGGTGACAGATTGGAGTTGGAGAGTGTCGGTTCCAAAAATTTCATAGCAGTTTTTGCCAAGGGCAGTGAGATTGACTTTTCAGTGAAGAAATTTTTGGAGACAAAACGGGGAACCTCTAGGTTGGTAAAAAATAACAATACGGATTCAAGGGAACATAATGGGGTTGGTGTTCATACCTCACACAGTGCAACTTCCTCTGTTAATCTGCCTCATCTTGAAAATTTTCCCCAGAAAAATGTCATTTCTGTATCAGATAACAGTACTGCAGTGAGGACTCCTAGGAGAAAGATGAGGTGTATGATGCCACCTAAGTCAAGAACATTAATTCAGGAGATGAACCAAATACTAGTGCGCCGCCGTGCGTCTTCTCGTGCAATGAGACCAAGGTGGTCATCCAAACTTGACCTGGAAATTCTTGCTGCAAGGTTGGAGATTGAGCATGCTCCTATAGTAACACATGACAAAGAGCTTTATGCTCCTCTCTTTCGCAATCTTTCTATGTTCAAAAGGAGTTATGAGCTCATGGAACGCACACTCAAAGTTTATATATACCAGGATGGAAATAAACCCATCTTCCATGAACCTATACTTAAGGGCCTGTATGCCTCGGAGGGTTGGTTTATGAAATTGATGGAGGAAAATAAGCATTTTGTTGTGGGGGATCCTGCAAAGGCCCACATGTTCTACATGCCATTCAGCTCACGTATGTTAGAGAAGTCCCTTTATGTACGTAACTCTCATAATCGAACAAATCTCCGTCGGTTTTTGAAGGACTATACAGATAAAATTTCTGCAAAATATCATTACTTCAACAGAACTGGTGGTGCTGACCATTTTCTTGTTGCTTGCCATGATTGGGCTCCATATGAAACGAGACACCATATGGAATACTGCATAAAAGCCCTCTGCAATGCTGATGTAACTCAAGGCTTTAAAATAGGAAGGGATGTTTCTCTTCCGGAAGCTTATGTCCGGTCAGTAAAAAATCCTCAGAGAGATCTGGGAGGAAAGCCTCCTCACCAACGATCCATCCTTGCTTTCTATGCTGGAAATATGCATGGTTATTTGCGTCCAATATTGCTAAAACACTGGAAGGAGAAAGACCCTGATATGAAGATATATGGCCCAATGCCTCGTGGTGTTGTAAACAAAATGAATTACATTCATCACATGAAGAACAGCAAATACTGTATATGCCCTAAAGGGTATGAGGTCAATAGTCCACGGGTGGTCGAAGCCATATTTTATGAGTGTGTGCCTGTGATTATATCTGACAATTTTGTGCCACCTTTTTTTGAGGTTTTGAATTGGGATGCGTTCTCAATAATCCTTGCAGAGAAAGATATTCCCAACTTGAAGCAGGTACTTCTTTCAGTGTCACAAGAGAAGTATCTCAAGTTGCAACTTGGGGTCAGAAAGGCTCAGAAACATTTTTTTTGGCATGTAAAACCCTTGAAGTATGACCTCTTCCACATGACCCTTCATTCAATTTGGTATAATAGAGTGTTTCAAATAAAGGTGAGATGA 1944 0.41 MNLCHMRNRKLLFLLAVLAANYLLFQSILVPYGNGNAPWSSVPQNQKHDKVSFPSLHSTPKYSTIWNPPTGSPAVIATVEKVHIPIVQDEVGLGEKKGMRNDEKGGLVSERNNSNNDVFELGADRNDVRSLAGKKDVRKGDRLELESVGSKNFIAVFAKGSEIDFSVKKFLETKRGTSRLVKNNNTDSREHNGVGVHTSHSATSSVNLPHLENFPQKNVISVSDNSTAVRTPRRKMRCMMPPKSRTLIQEMNQILVRRRASSRAMRPRWSSKLDLEILAARLEIEHAPIVTHDKELYAPLFRNLSMFKRSYELMERTLKVYIYQDGNKPIFHEPILKGLYASEGWFMKLMEENKHFVVGDPAKAHMFYMPFSSRMLEKSLYVRNSHNRTNLRRFLKDYTDKISAKYHYFNRTGGADHFLVACHDWAPYETRHHMEYCIKALCNADVTQGFKIGRDVSLPEAYVRSVKNPQRDLGGKPPHQRSILAFYAGNMHGYLRPILLKHWKEKDPDMKIYGPMPRGVVNKMNYIHHMKNSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWDAFSIILAEKDIPNLKQVLLSVSQEKYLKLQLGVRKAQKHFFWHVKPLKYDLFHMTLHSIWYNRVFQIKVR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02639 647 Pfam Exostosin family 315 595 IPR040911 -
Cca09g02639 647 PANTHER EXOSTOSIN FAMILY PROTEIN 197 645 - -
Cca09g02639 647 MobiDBLite consensus disorder prediction 181 208 - -
Cca09g02639 647 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 197 645 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02639 Cca-Chr9 52006596 52010082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02639 - - gmx:100789015 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02639 09 52006596 52010082 Cca09g02639 09 52006596 52010082 ECH
Cca09g02639 09 52006596 52010082 Cca08g00104 08 1444084 1459036 PCT