Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g02624 | ATGGGTAGCGACAACGTTAACCTCACCGTTTCAGAGAGCACCAACAACATTGTGTGGATGCCTCTGTCGGTATCAACATCCAACAGTTCCATAGATTTGGAAGCTTTTGATCTGGACGAGGCTCTCGGCCTCGCGGTGGTAGACGGAGAGTCACGCCGTCCATTTATGGCGTGGGAGAGCTTCGTCTCCAACTTGCCTACCGTTAACCACGTGAAACGGGACGACGTTTGCTCCGTTTGCATGGAAGGGTTCACCCTGCGCAACACGGATGAGGAAAACAAACGAGTCCCGTGCGGCCACGTGTACCATTCAAATTGCATCACCCTCTGGTTGGAGCACTGCAACTCTTGCCCACTATGTCGCCGCCATATCACCTTTTTCTAA | 384 | 0.526 | MGSDNVNLTVSESTNNIVWMPLSVSTSNSSIDLEAFDLDEALGLAVVDGESRRPFMAWESFVSNLPTVNHVKRDDVCSVCMEGFTLRNTDEENKRVPCGHVYHSNCITLWLEHCNSCPLCRRHITFF | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g02624 | 127 | ProSiteProfiles | Zinc finger RING-type profile. | 77 | 121 | IPR001841 | - | |
Cca09g02624 | 127 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 29 | 124 | - | - | |
Cca09g02624 | 127 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 126 | IPR013083 | - | |
Cca09g02624 | 127 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE | 29 | 124 | - | - | |
Cca09g02624 | 127 | Pfam | Ring finger domain | 76 | 121 | IPR001841 | - | |
Cca09g02624 | 127 | SMART | ring_2 | 77 | 120 | IPR001841 | - | |
Cca09g02624 | 127 | SUPERFAMILY | RING/U-box | 70 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g02624 | Cca-Chr9 | 51869506 | 51870031 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g02624 | 33 | 124 | C3H Transcription Factor Family | AT5G01980 | 43.299 | 1.58e-14 | 67.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g02624 | - | K22378 | gmx:102669154 | 190.274 |