Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02622 ATGGAGGGGACAGGTGGAGACGCAGTTCGTGCCTCTCTCTTTTTTTCCTTTCTCCACTCACAATTCACAATAGATGCGTGTGCCATCAACAAAACTTACATTTTCCTCACACGTGTCGCTGTCTCGCCTCTCCTTTCTGCTCCTTTTATCGCCTCCTCGCTTCTTTTTCTTCCCCCCTCTTCTCTGTCTGCTCTCTCAACCACGACACCGTTTGCGATGGAGGAGGACGAGCAACTCGAACGATTCCACTCCGAGTTCGCCTCCACCAGTTCCGGCTCCGCCATTTCCTCCACCGACGATTTCCGCAACCTCACCAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCCGTCGCGGCTCTCGCGCCGCCGCCCAGGGACAAGTGCGTCGGAAGGACTAACAAGGGAGTGAGTTGGGGACACACTTCGGTGATTGGGAGGCGGAAGGAGATGGAGGACGCCGTCGCTGTTATTCCGGGATTCATGTCTCGCACCTGTTATCATGTCGGCGGTTGTACGGCTCCCGGCTCCAGATCCTCCTGTGAGATCGCTCCACTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCCAAGCGAATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGCAAGTGCAGCTGAATGGCAGAGAAGATGGGAAACCGTATTTGCTAACAGTTTTGACAGGACTGACAATGAAATCCTATCTGACACAGTTGCACCAGAAATGGTAGGATCTACTGCCTCTGTAGTGGTTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACAATCCCCCTAACAGTGGATCAGAAGGTGATCGGTACTTGA 915 0.5366 MEGTGGDAVRASLFFSFLHSQFTIDACAINKTYIFLTRVAVSPLLSAPFIASSLLFLPPSSLSALSTTTPFAMEEDEQLERFHSEFASTSSGSAISSTDDFRNLTSSGDISSISSGSGEIPPVAALAPPPRDKCVGRTNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCYHVGGCTAPGSRSSCEIAPLHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMASAAEWQRRWETVFANSFDRTDNEILSDTVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTIPLTVDQKVIGT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02622 304 Gene3D - 132 302 IPR036457 -
Cca09g02622 304 PANTHER ALPHABET, ISOFORM E-RELATED 127 300 - -
Cca09g02622 304 CDD PP2Cc 145 301 IPR001932 -
Cca09g02622 304 Pfam Protein phosphatase 2C 151 301 IPR001932 -
Cca09g02622 304 SUPERFAMILY PP2C-like 137 301 IPR036457 -
Cca09g02622 304 ProSiteProfiles PPM-type phosphatase domain profile. 143 304 IPR001932 -
Cca09g02622 304 ProSitePatterns PPM-type phosphatase domain signature. 193 201 IPR000222 GO:0043169
Cca09g02622 304 SMART PP2C_4 133 304 IPR001932 -
Cca09g02622 304 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 127 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02622 Cca-Chr9 51846238 51855555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02622 144 300 PP2C-type Phosphatase Gene Family AT4G26080 47.826 2.97e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02622 K14497 - gmx:100793293 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02622 09 51846238 51855555 Cca09g02622 09 51846238 51855555 ECH