Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02605 ATGAAGATCGAGGAACTGGACGACGTTGAGTGTAGCAGCGACGAGAGGCAGATTGTGAGCGTTGATGCTAAGAGAGCGTTGGTGGGAGCAGGTGCACGGATCCTGTTCTATCCCACACTCTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAATCGACGAGTTTCTGTTACTGGGCGCTGTTCCGTTCCCCAAGGACGTTCCTCAGTTGAAGACGCTTGGTGTGGGTGGTGTGATTACTCTCAACGAGCCTTATGAAACCTTGGTGCCTTCGAAGTTGTATCGGGCTCACGGGATTGATCATTTGGTCATTCCCACTAGAGATTACCTCTTTGCCCCCTCATTTGTTGATATCGACCGGGCTGTGCAGTTCATTCACCAGAATGCAACTTGCGGTAAAACTACGTATGTTCACTGTAAAGCCGGGCGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATACAAGCACATGACACCTGCTGCCGCACTGGAATATGTTCGGTCTCGAAGGCCTAGAGTCCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCGAAGGCCATGTCCTTTACCATACTCACCCTCTGGGGACGCAGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCATAGCACATGTGATGCTGGTATGGAGCTGGCCATTGTTCCTAAAGTGCCAAAGACTAAACCCATGATTGCAAGATTATCTTGCCTGTTTGCATCCTTAAAGGTGTCTGGTAGTAGTGTACCAATGACCAGGCGGCTCCCGGTTTCTGAGTCACGTGCTTGCTAA 834 0.4868 MKIEELDDVECSSDERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPQLKTLGVGGVITLNEPYETLVPSKLYRAHGIDHLVIPTRDYLFAPSFVDIDRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPCPLPYSPSGDAVLITKADLEGYHSTCDAGMELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02605 277 Pfam Dual specificity phosphatase, catalytic domain 77 198 IPR000340 GO:0008138|GO:0016311
Cca09g02605 277 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 123 191 IPR000387 GO:0016311|GO:0016791
Cca09g02605 277 CDD PTPMT1 55 199 IPR044596 GO:0004721
Cca09g02605 277 SMART dsp_5 58 199 IPR020422 GO:0006470|GO:0008138
Cca09g02605 277 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 198 IPR029021 -
Cca09g02605 277 ProSitePatterns Tyrosine specific protein phosphatases active site. 144 154 IPR016130 GO:0016311|GO:0016791
Cca09g02605 277 ProSiteProfiles Dual specificity protein phosphatase domain profile. 55 202 IPR020422 GO:0006470|GO:0008138
Cca09g02605 277 PANTHER - 5 277 - -
Cca09g02605 277 Gene3D Protein tyrosine phosphatase superfamily 55 200 IPR029021 -
Cca09g02605 277 PANTHER OS01G0739200 PROTEIN 5 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02605 Cca-Chr9 51637783 51640528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02605 17 265 Protein tyrosine phosphatase (PTP) family AT2G35680 53.242 1.74e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02605 - - gmx:100817410 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02605 09 51637783 51640528 Cca09g02605 09 51637783 51640528 ECH