Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02586 ATGGAAGGTTTAACAACAAAGGATAAATTAATCCCTAATTCAGCAATACTGCAGAGTGAGAACTTGACAAAGTATATACTGGAGACCAGCGTTTACCCACGAGAGGCAGAGACTCTCAAAGAGTTAAGGAATGCCACTGCAAGCCACTCTAGGGGCTTCATGGGCGTTGCACCTGATGCAGGCCAGCTAATGGCCTTGCTATTGAAGCTGTTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTACTCACAGCACTCGCAATTTCTCTTGATGGAAAGATTATAGCCATAGATCCAGACAAAAAAGCTTATGAGATAGGACTACCATTCATTAAAAAGGCTGGTGTAGAACACAAGATCGACTTCAAAGAGTCTCCAGCTTTACCTGTTCTTGATAAACTCTTAGAAGATCCTTCGAATAGGGAATCTTTTGACTTTGCCTTCGTTGATGCTGATAAAGATAACTATTGGAATTACCACGAGCGACTTCTTAAACTGGTAAAGATTGGTGGGATAATCATCTATGATAACACTCTTTGGGGAGGAACTGTTGCATTGCCCGAAGAGGATGTTCCAACACCCAAAAGAAGATTCAGGAAGGCTACACTGGATTTCAACAAAGCAATTGCAGATGATTCTCGCGTTGAAATTTCTGCTGTTTCAATAGGTGATGGCTTCACTATCTGCAGGCGTACTCCTTGA 720 0.4167 MEGLTTKDKLIPNSAILQSENLTKYILETSVYPREAETLKELRNATASHSRGFMGVAPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALAISLDGKIIAIDPDKKAYEIGLPFIKKAGVEHKIDFKESPALPVLDKLLEDPSNRESFDFAFVDADKDNYWNYHERLLKLVKIGGIIIYDNTLWGGTVALPEEDVPTPKRRFRKATLDFNKAIADDSRVEISAVSIGDGFTICRRTP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02586 239 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Cca09g02586 239 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 237 IPR029063 -
Cca09g02586 239 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
Cca09g02586 239 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 238 IPR002935 GO:0008171
Cca09g02586 239 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 7 238 - -
Cca09g02586 239 PANTHER O-METHYLTRANSFERASE-RELATED 7 238 - -
Cca09g02586 239 CDD AdoMet_MTases 77 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02586 Cca-Chr9 51469293 51470880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02586 15 237 Monolignol Biosynthesis Gene Families AT4G26220 66.368 1.01e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02586 K00588 - gmx:100792717 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02586 09 51469293 51470880 Cca09g02586 09 51469293 51470880 ECH