Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02585 ATGGAAGGCTCAACAACAAAGGATAACTTACCCTCTAAACCAATAATACTGCAGAGTCACAACTTAAAAAAGTATATACTGGAGACCAGCGTTTACCCACGAGAAACTGAGATTCTCAAAGAGCTCCGGAATGCCACTGCAAGCCACCCTTGGAGCCATGTGGCCGCTGAACCCGATTCGGGTCAGTTAATAGCCATGCTCTTGAAGCTGTTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACGGGATACTCTCTTCTCCTCACAGCACTCACCATTCCTCATGATGGAAAGATTATAGCCGTGGATCCAGACAGAAAAGCTTATGAGATAGGACTACCATTCATTAAAAAGGCTGGTGTAGAGCACAAAATCGACTTCAAAGAATCTCCAGGTTTACTCGTTCTTGATAAACTCATAGAAGATGTGAGCATGCACCATTCTTTGTTACTAACGTTACACTGGCAATTTTATATTTTTTCACATTTCTCCTTAGTAAGGTAA 507 0.4142 MEGSTTKDNLPSKPIILQSHNLKKYILETSVYPRETEILKELRNATASHPWSHVAAEPDSGQLIAMLLKLLNAKKTIEVGVFTGYSLLLTALTIPHDGKIIAVDPDRKAYEIGLPFIKKAGVEHKIDFKESPGLLVLDKLIEDVSMHHSLLLTLHWQFYIFSHFSLVR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02585 168 Pfam O-methyltransferase 28 145 IPR002935 GO:0008171
Cca09g02585 168 PANTHER PROTEIN, PUTATIVE-RELATED 12 151 - -
Cca09g02585 168 Gene3D Vaccinia Virus protein VP39 7 149 IPR029063 -
Cca09g02585 168 PANTHER O-METHYLTRANSFERASE-RELATED 12 151 - -
Cca09g02585 168 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 168 IPR002935 GO:0008171
Cca09g02585 168 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 145 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02585 Cca-Chr9 51463958 51465625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02585 16 143 Monolignol Biosynthesis Gene Families AT4G26220 68.750 2.58e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02585 K00588 - gmx:100780516 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02585 09 51463958 51465625 Cca09g02585 09 51463958 51465625 ECH