Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02574 ATGGCCTTGTTATTGAAGCTGTTGAATGCAAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTACTCACAGCACTCGCAATTCCTCTTGATGGAAAGATTATAGCCATAGATCCAGACAAAAAAGCTTATGACATAGGACTACCATTCATTAAAAAGGCTGGTGTAGAACACAAGATCGACTTCAAAGAGTCTCTAGCTTTACCTGTTCTTGATAAACTCTTAGAAGATCCTTCGAATAGGGAATCTTTTGACTTTGCCTTCGTTGATGCTGATAAAGATAACTATTGGAATTACCACGAGCGACTTCTTAAACTGGTAAAGATTGGTGGGATAATCATCTATGATAACACTCTTTGGGGAGGAACTGTTGCATTGCCCGAAGAGGATGTTCCAACACCCAAAAGAAGATTCAGGAAGGCTACACTGGATTTCAACAAAGCAATTGCAGATGATTCGCGCGTTGAAATTTCTGCTGTTTCAATAGGTGATGGCTTCACTATCTGCAGGCGTACTCCTTGA 531 0.4011 MALLLKLLNAKKTIEVGVFTGYSLLLTALAIPLDGKIIAIDPDKKAYDIGLPFIKKAGVEHKIDFKESLALPVLDKLLEDPSNRESFDFAFVDADKDNYWNYHERLLKLVKIGGIIIYDNTLWGGTVALPEEDVPTPKRRFRKATLDFNKAIADDSRVEISAVSIGDGFTICRRTP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02574 176 Gene3D Vaccinia Virus protein VP39 1 175 IPR029063 -
Cca09g02574 176 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 174 IPR029063 -
Cca09g02574 176 Pfam O-methyltransferase 2 174 IPR002935 GO:0008171
Cca09g02574 176 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 175 - -
Cca09g02574 176 PANTHER O-METHYLTRANSFERASE-RELATED 1 175 - -
Cca09g02574 176 CDD AdoMet_MTases 18 118 - -
Cca09g02574 176 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 175 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02574 Cca-Chr9 51322612 51323307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02574 1 174 Monolignol Biosynthesis Gene Families AT4G26220 66.667 1.79e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02574 K00588 - gmx:100792717 310.071